Hydrophobicity Plot

Using Python/BioPython/Google Colab

This is a simple Hydrophobicity plot program using Python/BioPython.

• Method 1 - Using BioPython and FASTA input file
• Method 2 - Using BioPython and FASTA sequence
• Method 3 - Using Python and raw sequence

The sample output using Method 3 is below,

Demo

The interactive demo of the three methods using Google Colab are below:

• Method 1 - Parses FASTA file to get sequence id and sequence
• Method 2 - Parses FASTA string to get sequence id and sequence
• Method 3 - Use raw sequence only

And of course all programs are open source with a public repository on GitHub.

License

MIT

Free Program, Hell Yeah!