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Software package for assigning SARS-CoV-2 genome sequences to global lineages.

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AzriRosehaizat/pangolin

 
 

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pangolin

pangolin test output BioConda version European Galaxy server

Phylogenetic Assignment of Named Global Outbreak LINeages

Full pangolin documentation found at cov-lineages.org

Find the pangolin web application here, thanks to the Centre for Genomic Pathogen and Surveillance!

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Software package for assigning SARS-CoV-2 genome sequences to global lineages.

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  • Python 98.5%
  • Dockerfile 1.5%