- Removed compilant parameter from prokka.

- Fixed docker file : perl module incompatibility

- Updated Dockerfile

- Migrated tests to github actions
- Updated environment.yml for conda.
- Fixed issues #12,#14,#15,#17. Cases with no plasmids or too many. Relative paths in html images.

‘v1.6.3’ v1.6.3

‘v1.6.2’ v1.6.2

‘v1.6.1’ v1.6.1

- Bioconda guidelines compatibility

- Improved plasmid database script

- support for bioconda guidelines

- download plasmid database script optimized

Added:

- Conda support
- Kmer based prefilter

- Specific config file for only reconstruct parameter

- Protein databases can be properly used
- Fixed bug in blast_to_complete.sh, space in file name.
- Fixed issues with circleci.