Skip to content

Commit

Permalink
more with name changes
Browse files Browse the repository at this point in the history
  • Loading branch information
bomeara committed May 12, 2023
1 parent 58c1e31 commit e799578
Show file tree
Hide file tree
Showing 8 changed files with 3 additions and 31 deletions.
7 changes: 3 additions & 4 deletions NAMESPACE
Original file line number Diff line number Diff line change
@@ -1,9 +1,6 @@
# Generated by roxygen2: do not edit by hand

export(aggregate_category)
export(phydo_convert_to_Beaulieu_data)
export(phydo_drop_type)
export(phydo_fitGeiger)
export(check_continuous)
export(contrasts_correlations)
export(convert_continuous_to_discrete)
Expand All @@ -28,10 +25,12 @@ export(locality_add_habitat_biome)
export(locality_clean)
export(match_data)
export(pbdb_taxon_query)
export(phydo_convert_to_Beaulieu_data)
export(phydo_drop_type)
export(phydo_fitGeiger)
export(plot_gis)
export(render_phydo)
export(render_quarto)
export(run_biogeobears)
export(run_phydo)
export(species_get_biogeographic_data)
export(spocc_taxon_query)
4 changes: 0 additions & 4 deletions R/dataFunctions.R
Original file line number Diff line number Diff line change
Expand Up @@ -7,9 +7,6 @@
#' @param gbif_limit Maximum number of records to return (hard limit is 200000)
#' @return A data frame (tibble) of key, scientific name, decimal latitude, and decimal longitude
#' @export



gbif_taxon_query <- function (query, rank=NULL, gbif_limit=200000){
key <- rgbif::name_suggest(q=query, rank=rank)$key[1]
dat <- rgbif::occ_search(taxonKey=key, fields="minimal", limit=gbif_limit)
Expand All @@ -25,7 +22,6 @@ gbif_taxon_query <- function (query, rank=NULL, gbif_limit=200000){
#' @param gbif_limit Maximum number of records to return (hard limit is 200000)
#' @return A data frame (tibble) of key, scientific name, decimal latitude, and decimal longitude
#' @export

gbif_species_query <- function (species, gbif_limit=200000){
all.records <- data.frame()
for (species_index in seq_along(species)) {
Expand Down
File renamed without changes.
File renamed without changes.
File renamed without changes.
File renamed without changes.
File renamed without changes.
23 changes: 0 additions & 23 deletions man/species_get_biogeographic_data.Rd

This file was deleted.

0 comments on commit e799578

Please sign in to comment.