A Julia package to read, write and manipulate macromolecular structures

Calculate atomic lattice plane densities in arbitrary crystal structures (CIF input) for arbitrary lattice planes (HKL indices).

A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.

Gogh is a collection of color schemes for various terminal emulators, including Gnome Terminal, Pantheon Terminal, Tilix, and XFCE4 Terminal also compatible with iTerm on macOS.

List of Computer Science courses with video lectures.

Connect to Google Colab using SSH

PyScript is an open source platform for Python in the browser. Try PyScript: https://pyscript.com Examples: https://tinyurl.com/pyscript-examples Community: https://discord.gg/HxvBtukrg2

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

A Microsoft Windows® USB installation media preparer for GNU+Linux

A Plasmid Editor

Clustering Evaluation in R

SRA Tools

LongQC is a tool for the data quality control of the PacBio and ONT long reads.

Jupyter widget to interactively view molecular structures and trajectories

Computational Crystallography Toolbox

Protocol Buffers - Google's data interchange format

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294

A console-based alignment viewer

scikit-learn: machine learning in Python

Contacts-based classifier of biological and crystallographic interfaces

JavaScript artefacts and deployment documents for JalviewJS

Official git repository for Biopython (originally converted from CVS)

Generated color schemes for sequence alignment visualizations

Open-Source Notification Platform. Embeddable Notification Center, E-mail, Push and Slack Integrations.

1D Feature Viewer

🌈 Create color blind friendly color palettes in Java

Split Kmer Analysis

MMseqs2: ultra fast and sensitive search and clustering suite

A dock for the Gnome Shell. This extension moves the dash out of the overview transforming it in a dock for an easier launching of applications and a faster switching between windows and desktops.

🍶 Genome assembly with short sequence reads