Merge pull request ncbo#13 from sifrproject/change_umls_base_uri

Choosing the base URI of UMLS Semantic Types
Beira-BF · Apr 13, 2015 · ce50db9 · ce50db9
2 parents 0d2bc75 + 4463f25
commit ce50db9
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diff --git a/conf_sample.py b/conf_sample.py
@@ -9,3 +9,4 @@
 
 UMLS_VERSION = "2011ab"
 
+UMLS_BASE_URI = "http://purl.bioontology.org/ontology/"
diff --git a/umls2rdf.py b/umls2rdf.py
@@ -83,7 +83,7 @@
 MRSAB_LAT = 19
 
 def get_umls_url(code):
-    return "http://purl.bioontology.org/ontology/%s/"%code
+    return "%s%s/"%(conf.UMLS_BASE_URI,code)
 
 def flatten(matrix):
     return reduce(lambda x,y: x+y,matrix)
Original file line number	Diff line number	Diff line change
Expand Up		@@ -9,3 +9,4 @@

		UMLS_VERSION = "2011ab"

		UMLS_BASE_URI = "http://purl.bioontology.org/ontology/"