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Commits on Sep 5, 2014

• r816: read .alt file (not tested)

  lh3

  committed
  e4ad616

Commits on Apr 11, 2014

• dev-472: get rid of bwa_fix_xref()

  Show description for 8638cfa
  lh3

  committed
  8638cfa

Commits on Feb 26, 2013

• r283: prepare for fixing cross-ref aln

  lh3

  committed
  61dd3bf

Commits on Feb 11, 2013

• code backup

  lh3

  committed
  59eaf65

Commits on Feb 1, 2013

• routine to get subsequence from 2-bit pac

  lh3

  committed
  00e5302

Commits on Oct 25, 2011

• fixed a minor issue about +/-1

  

  Heng Li

  committed
  7664795

• concatenate for-rev sequences in the end

  

  Heng Li

  committed
  aabb807

Commits on Oct 21, 2011

• use forward-only pac to reduce memory

  

  Heng Li

  committed
  1cb409a

Commits on Jun 9, 2011

• automatically choose the algorithm for BWT

  

  Heng Li

  committed
  72563c3

Commits on Jan 14, 2011

• Imported from my local bwa repository, the master repository.

  

  Heng Li

  committed
  007c3eb

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