Repository for the Python Crop Simulation Environment

The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites

这是一个基于AIot技术的智能育种箱，集成了温湿度、光照、浇灌、气体等一系列环境参数的监控和控制功能。

Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized using co…

Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.

seed workflow tutorial

Notebook for performing germination studies using plantCV

Accurate Machine Learning Based Germination Detection, Prediction and Quality Assessment of Different Seed Cultivars

Packages for graphics and index for seed germination ecophysiological evaluation

3D GWAS across multiple phenotypes

A depth camera based open-source system for mice homecage monitoring

The code for the Doing More With Less: A Multi-Task Deep Learning Approach in Plant Phenotyping paper, Frontiers in Plant Science

An explainable Deep Machine Vision framework for Plant Stress Phenotyping

The “Phenobox”, a flexible, automated, open-source plant phenotyping solution

A versatile, fully open-source pipeline to extract phenotypic measurements from plant images

Analysis of plant root measurement via automatic segmentation.

Computation of root phenes from 3D point clouds.

Rhizoscan

Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.

Analysis tools for SLEAP-based plant root phenotyping.

Software to collect data from OPC UA compatible devices into InfluxDB

Software for data collection, processing and transfering. Mostly for image and process data

An open-source GUI for reconstructing plant 3D architecture from laser scans.

Implementation of the 3D reconstruction pipeline optimized for plant branching structures.

High Precision Leaf Instance Segmentation for Phenotyping in Point Clouds Obtained Under Real Field Conditions

In-Field Phenotyping Based on Crop Leaf and Plant Instance Segmentation