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A web application that helps researchers design optimal CRISPR guide RNA sequences. It analyzes input DNA, identifies potential target sites, and scores the guide RNAs based on factors like GC cont…

Python 1 Updated Feb 8, 2025

i hate minimalism so...

JavaScript 5,445 382 Updated Mar 7, 2025

A powerful terminal-based bioinformatics tool designed for DNA sequence analysis.

Python 1 Updated Jan 28, 2025

Convert PDF to markdown + JSON quickly with high accuracy

Python 22,402 1,364 Updated Mar 7, 2025

Master programming by recreating your favorite technologies from scratch.

Markdown 350,686 32,515 Updated Sep 3, 2024

A collection of notebooks/recipes showcasing some fun and effective ways of using Claude.

Jupyter Notebook 10,913 1,245 Updated Mar 7, 2025

fabric is an open-source framework for augmenting humans using AI. It provides a modular framework for solving specific problems using a crowdsourced set of AI prompts that can be used anywhere.

Go 29,854 3,072 Updated Mar 8, 2025

Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"

PostScript 18,631 2,261 Updated Nov 13, 2024

Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.

Jupyter Notebook 47,741 5,076 Updated Jan 22, 2025

Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology

Jupyter Notebook 111 14 Updated Aug 21, 2024

A user-friendly graphical interface for downloading videos from various platforms using yt-dlp.

Python 3 Updated Feb 12, 2025

Streamlining SLAM-seq analysis with ultra-high sensitivity

Python 45 24 Updated May 22, 2024

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,023 332 Updated Nov 28, 2024

Publication-ready volcano plots with enhanced colouring and labeling

R 424 84 Updated Jun 12, 2024

➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

R 527 47 Updated Feb 24, 2024

The fastai book, published as Jupyter Notebooks

Jupyter Notebook 22,711 8,742 Updated Aug 16, 2024

Python and bioinformatics code interview

Python 2 2 Updated Nov 26, 2018

The Leek group guide to genomics papers

486 174 Updated Nov 5, 2018

A Git-compatible VCS that is both simple and powerful

Rust 11,751 416 Updated Mar 9, 2025

Roadmap to becoming an Artificial Intelligence Expert in 2022

JavaScript 29,620 2,526 Updated Dec 31, 2023

dN/dS methods to quantify selection in cancer and somatic evolution

HTML 220 49 Updated Sep 29, 2023

scRNAseq analysis notes from Ming Tang

680 162 Updated Dec 2, 2024

Code and examples for JHU Computational Genomics class

Jupyter Notebook 299 111 Updated Oct 22, 2024

DNA2Protein is a web application that translates DNA sequences into protein sequences using a codon table. The application is built with Flask, a lightweight web framework for Python, and utilizes …

Python 1 Updated Feb 7, 2025

Papers from the computer science community to read and discuss.

Shell 91,438 5,858 Updated Feb 19, 2025

Anthropic's educational courses

Jupyter Notebook 9,562 827 Updated Nov 26, 2024

An opinionated list of awesome Python frameworks, libraries, software and resources.

Python 236,457 25,386 Updated Aug 11, 2024

A list of deep learning implementations in biology

2,044 484 Updated Aug 10, 2024

A curated list of awesome deep learning applications in the field of computational biology

1,905 314 Updated Nov 7, 2021

A collaboratively written review paper on deep learning, genomics, and precision medicine

HTML 1,254 271 Updated Dec 25, 2022
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