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contains leadfield for HCP-113922&105923 Cuba EEG- MC0000010
CCC-members · Mar 17, 2019 · 142851e · 142851e
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Showing 7 changed files with 10 additions and 6 deletions.
diff --git a/README.md b/README.md
@@ -15,3 +15,7 @@ Scripted from the brainstorm toolbox ver. Feb. 24 2019 and OpenMEEG-2.4.9999-Win
 4. Run scripted_fs_lf_ppl.m for Freesurfer anatomy files
 5. Run scripted_hcp_lf_ppl.m for HCP (Human Connectome Project) anatomy files
 6. You will see Gain.mat and patch.mat when the calculation is finished.
+
+# Note
+openmeeg ask for Microsoft Visual C++ 2010 Redistributable Package (x64), it can't be install sometimes.
+Please copy vcomp100.dll to C:\Users\<UsersName>\.brainstorm\openmeeg\win64
diff --git a/result_fs_MC0000010/Gain.mat b/result_fs_MC0000010/Gain.mat
diff --git a/result_fs_MC0000010/patch.mat b/result_fs_MC0000010/patch.mat
diff --git a/result_hcp_113922/Gain.mat b/result_hcp_113922/Gain.mat
diff --git a/result_hcp_113922/patch.mat b/result_hcp_113922/patch.mat
diff --git a/scripted_fs_lf_ppl.m b/scripted_fs_lf_ppl.m
@@ -20,9 +20,9 @@
 % RawFiles = {fullfile(pwd,'example data\MC0000010_EEG_anatomy_t13d_anatVOL_20060115002658_2.nii_out\mri\T1.mgz'), ...
 %     fullfile(pwd,'example data\MC0000010_EEG_anatomy_t13d_anatVOL_20060115002658_2.nii_out'), ...
 %     fullfile(pwd,'example data\MC0000010_EEG_data.mat'), ''};
-RawFiles = {'F:\MEEGfMRI\Data\CubaData\CHBMP_FSmri\bad cases\MC0000010_t13d_anatVOL_20060115002658_2.nii_out\mri\T1.mgz', ...
-    'F:\MEEGfMRI\Data\CubaData\CHBMP_FSmri\bad cases\MC0000010_t13d_anatVOL_20060115002658_2.nii_out', ...
-    'F:\MEEGfMRI\Data\CubaData\CHBMP_FSmri\bad cases\MC0000010_EEG_data.mat', ''};
+RawFiles = {'F:\MEEGfMRI\Data\andy\MC0000010_EEG_anatomy_t13d_anatVOL_20060115002658_2.nii_out\mri\T1.mgz', ...
+    'F:\MEEGfMRI\Data\andy\MC0000010_EEG_anatomy_t13d_anatVOL_20060115002658_2.nii_out', ...
+    'F:\MEEGfMRI\Data\andy\MC0000010_EEG_data.mat', ''};
 
 % Start a new report
 bst_report('Start', sFiles);

diff --git a/scripted_hcp_lf_ppl.m b/scripted_hcp_lf_ppl.m
@@ -16,7 +16,7 @@
 
 % Input files
 sFiles = [];
-SubjectNames = {'HCP'};
+SubjectNames = {'113922'};
 % RawFiles = {fullfile(pwd,'example data\113922_MEG_anatomy'), fullfile(pwd,'example data\113922_MEG_Restin_unproc\3-Restin\4D\c,rfDC')};
 RawFiles = {...
     'F:\MEEGfMRI\Data\HCP_S900\105923\MEG\anatomy', ...
@@ -71,12 +71,12 @@
     'SplitLength',  4000));
 
 % Save lead field
-load('F:\Data\brainstorm_db\Leadfield_Pipeline\data\HCP\@raw3-Restin_c_rfDC\headmodel_surf_openmeeg.mat');
+load('F:\Data\brainstorm_db\Leadfield_Pipeline\data\113922\@raw3-Restin_c_rfDC\headmodel_surf_openmeeg.mat');
 Gain3d=Gain; Gain = bst_gain_orient(Gain3d, GridOrient);
 save Gain Gain Gain3d;
 
 % Save patch
-load('F:\Data\brainstorm_db\Leadfield_Pipeline\anat\HCP\tess_cortex_mid.mat');
+load('F:\Data\brainstorm_db\Leadfield_Pipeline\anat\113922\tess_cortex_mid.mat');
 save patch Vertices Faces;
 
 % Save and display report