Update cosmic-pop Parsing of Binfrac Model. #683
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Fixed parsing of binfrac model. Now string values are properly handled.
katiebreivik
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Dec 12, 2024
* offner22 primary mass dependent binary fraction (#644) * added offner22 primary mass dependent binary fraction * pinning numpy version because of new numpy version released on june 16 (https://stackoverflow.com/questions/78634235/numpy-dtype-size-changed-may-indicate-binary-incompatibility-expected-96-from) * pinned numpy version so 3.7 works --------- Co-authored-by: katiebreivik <[email protected]> * Update utils.py (#648) * Update utils.py fix trapezoid import * Update utils.py missed one trapz * version bump and dropping below python3.9 (#653) * version bump and dropping below python3.9 * forward to numpy 1.26.0 * trying a different version * fix trapz import * Update build_wheels_and_publish.yml explicitly install gcc * Update build_wheels_and_publish.yml trying to fix gfortran * Update build_wheels_and_publish.yml specifying path with symlink, checking path * Update build_wheels_and_publish.yml (#654) * Update build_wheels_and_publish.yml * Update _version.py * Update meson.build * Update pyproject.toml (#655) * Version bump for pip (#656) * Update meson.build * Update _version.py * Add power law sampling options for ``porb`` and ``q`` (#651) * add `q_power_law` parameter to change the power law of the mass ratio distribution * allow custom power laws for orbital periods * add mass ratio sampling test * add test for custom porb power laws * add to changelog * New ``gamma`` option for circumbinary discs (#652) * add new gamma prescription, add some int() statements * add details to docs page * update ini files * * Modifying the init file to include the commit hash. (#659) *Created get_commit_hash file that finds the commit hash. *Modified the meson.build file to run get_commit_hash when cosmic is installed. * Created maximum wall time option (#620) * Added compression options for pandas * Created maximum wall time argument * Add debugging setup, avoid NaNs from timestep issue (#647) * setup debugging environment * ignore a bunch of files * add a testing fortran script * move debugging to its own folder * add a python script for creating the input * add a simple makefile for testing * important change: use `loop` instead of `1000` for timestep condition * add a note about settings * clean up vscode setup * I can't count 🙃 * added new test suite location * fixing numpy pinned version * forcing numpy version I guess --------- Co-authored-by: katiebreivik <[email protected]> Co-authored-by: Katie Breivik <[email protected]> * allow a gamma of -3 in error_check (#661) * fixing wheel build for pypi, hopefully * tiny version bump (#665) * Update _version.py * Update pyproject.toml add @TomWagg as dev * Update meson.build bump version * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml removing gfortran symlink * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml (#666) * Update build_wheels_and_publish.yml * this should be a working build. * add meson to requirements * Fixing linux only wheel (#667) * Update build_wheels_and_publish.yml * adding in python versions * Update build_wheels_and_publish.yml * Update meson.build * Update meson.build * Update pyproject.toml * Pip fix (#669) * add DS_Store to ignore * finalllllly got the platform specific wheels built with a pure: false * tiny bump in version for tag * Update build_wheels_and_publish.yml need to repair linux build with cibuildwheel for PyPI * Update meson.build forgot to bump version here * build wheels and publish fix (#670) * pins cibuildwheel==2.17.0 so that we can build across macOS versions. * allow push to pypi * add x_86 and arch compatibility for wheels (#671) * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml * Update meson.build version * Update _version.py version * Update pyproject.toml version * combine the bpp and bcm columns * pass bpp column information * add bpp column variables * pass all columns to bpp_array * only need 49 actually * bin nums separate, only index certain parts of table * all the binaries! * change writebpp function to use any columns * add new bcm variables * switch to a single function for simplicity * change everything to writetab * pass deltam to comenv too * use writetab not writebpp in comenv.f * ip not jp * add bcm stuff and convert integer columns with a loop (add kstars/evol_type) * `rsunau` ended up in the wrong place, this should fix porbs * Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows (#672) Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 3 to 4.1.7. - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](actions/download-artifact@v3...v4.1.7) --- updated-dependencies: - dependency-name: actions/download-artifact dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * metisse update * Pypi fix (#676) * trying out pypi tests * add in wheel repair * trying native build * adding in pytest check * adding in pytest install * Update build_wheels_and_publish.yml remove the cibuildwheel environment variables and updating action versions * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml Had wrong download action version * Update build_wheels_and_publish.yml add in auditwheel for manylinux * Update build_wheels_and_publish.yml (#677) * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml split mac and linux builds * Update build_wheels_and_publish.yml trying to get cibuildwheels working again for linux * Update pyproject.toml removed pytest from cibuildwheel args * Update build_wheels_and_publish.yml don't actually publish * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml * Update build_wheels_and_publish.yml * Update _version.py * Update pyproject.toml * Update meson.build * Implement new kick prescription (#678) * start a function for changing bases * add cross product function * fix indents * better variables and copy over initial function part * angles, better variables, natal kick done * fix transformation for pre-disrupted binaries * add vector calculations * everything done except Euler angles * add dot product and angle functions * fix indentation, add kick info logging of disrupt * start adding Euler angles * rename files * fix vector variables * get rid of redundant anomaly stuff * snstar->sn, update jorb, record in kick_info * make kick info bigger * /= is not a thing in fortran who knew * it lives! (compiles!) * move helpers, calculate new sep, use correct mass! * better docstring info * add check for collisions * clean up all of the units * properly update Euler angles * declare all the variables * put the old function back in * change kickflag definition * change default kickflag to 1 not 0 * update kickflag docs * update ini files * missed some kickflags * calculate h_mag earlier, fix jorb units * fix tiny typo * update tests to check on OLD kick prescription for now * add another test for ejection velocities * update changelog and version * more version updates --------- Co-authored-by: katiebreivik <[email protected]> * fix error check * Fix NaNs coming from supernova kicks (#679) * account for cases with no natal kick and ecc_prev=0.0 * don't forget binstate mergertype bookkeeping * Update cosmic-pop (#683) Fixed parsing of binfrac model. Now string values are properly handled. * get working * fixing tests but as a hack for a couple of them because we updated the kicks and I dont have time to fix it --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: MarkGM02 <[email protected]> Co-authored-by: Tom Wagg <[email protected]> Co-authored-by: elenagonzalez870 <[email protected]> Co-authored-by: Vera Eris Del Favero <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Fixed parsing of binfrac model. Now string values are properly handled.