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A repo with several common tools for 3D image processing

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Euro-BioImaging/image_processing

 
 

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A toolbox for the processing of 3D microscopy images.

Included are tools for feature enhancement, segmentation, geometrical transformations and etc.

Use the following command for installing the package:

pip install git+https://github.com/bugraoezdemir/image_processing

Note that the pip installation deliberately excludes the 'wrappers' sub-package because of the high number of dependencies. The 'wrappers' package will be included in a separate installation recipe later.

Use the following to access the Binder to implement the notebook "line_filter_test".

Binder

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A repo with several common tools for 3D image processing

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  • Python 98.8%
  • Jupyter Notebook 1.2%