Data is stored in the data folder.
Batch procssing log files are stored in the logs folder.
src contains the source code for the analysis.
R contains the additional modules which hold functions for repetitive use for the analysis.
Code are intended to run with the root directory of this project (top level directory that holds files in this repo) as the working directory.
This can be achieved by open the R project file crispr_analysis.Rproj in RStudio. Or by setting the working directory to the root directory in R.