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Pull requests: Gaius-Augustus/BRAKER

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Pull requests list

fix for using other openjdk java (e.g. Zulu from Azul)
#881 by schloegl was merged Nov 5, 2024 Loading…
1
fixed pseudo gene removal in evaluation script
#824 by LarsGab was merged May 13, 2024 Loading…
1
within set_JAVA_PATH, generalize check for java version and prevent substitutions within awk command
#796 by douglasgscofield was merged May 10, 2024 Loading…
1
remove AUGUSTUS ENV overwrites from Dockerfile
#773 by sanjaysrikakulam was merged Feb 27, 2024 Loading…
1
Update README.md
#763 by KatharinaHoff was closed Feb 17, 2024 Loading…
Compleasm
#739 by KatharinaHoff was merged Jan 12, 2024 Loading…
updating compleasm branch
#730 by KatharinaHoff was merged Dec 22, 2023 Loading…
renamed helpMod.pm to helpMod_braker.pm
#729 by KatharinaHoff was merged Dec 22, 2023 Loading…
Updating compleasm branch
#728 by KatharinaHoff was merged Dec 22, 2023 Loading…
Utr from stringtie
#727 by KatharinaHoff was merged Dec 22, 2023 Loading…
@MarioStanke @LarsGab
fix issue #669
#701 by LarsGab was merged Nov 14, 2023 Loading…
Update braker.pl
#698 by KatharinaHoff was closed Nov 9, 2023 Loading…
added gzip support for RNA-Seq reads
#697 by LarsGab was merged Nov 8, 2023 Loading…
fixed bug in skipGeneMarkETP
#691 by LarsGab was merged Oct 20, 2023 Loading…
Ifs verbosity
#689 by LarsGab was merged Oct 19, 2023 Loading…
Ifs verbosity
#688 by LarsGab was closed Oct 19, 2023 Loading…
adding Augustus parameters foldr that is missing from Debian package
#682 by KatharinaHoff was merged Oct 11, 2023 Loading…
@LarsGab
Update README.md
#671 by KatharinaHoff was merged Sep 18, 2023 Loading…
1
Update Dockerfile
#661 by KatharinaHoff was merged Aug 22, 2023 Loading…
@LarsGab
Gff3 issue
#624 by LarsGab was merged Apr 25, 2023 Loading…
remove . at the end of protein sequences
#583 by LarsGab was merged Mar 6, 2023 Loading…
Merge pull request #578 from Gaius-Augustus/master
#579 by KatharinaHoff was merged Mar 2, 2023 Loading…
Fixing README.md
#578 by KatharinaHoff was merged Mar 2, 2023 Loading…
@KatharinaHoff
Update README.md
#561 by KatharinaHoff was merged Jan 15, 2023 Loading…
@MarioStanke @LarsGab
1
Update log_reg_prothints.pl to ProtHint's version as suggested in #473
#547 by KatharinaHoff was merged Nov 7, 2022 Loading…
@KatharinaHoff @LarsGab
1
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