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Commits on Oct 19, 2023

• Fix for highly_variable_genes flavor=seurat modifying layer (scverse#2698)

  Show description for 373c585
  

  eroell

  and

  flying-sheep

  authored
  373c585

• Add check for release notes (scverse#2569)

  Show description for 82fc260
  

  flying-sheep

  and

  ivirshup

  authored
  82fc260

Commits on Oct 17, 2023

• correct scanorama_integrate docs (scverse#2647)

  Show description for 0090bb9
  

  3 peopleauthored
  0090bb9

• Revert accidentally merged PR "Handle Dask arrays in some utilities (scverse#2621)" (scverse#2694)

  flying-sheep

  authored
  e4db36d

• Handle Dask arrays in some utilities (scverse#2621)

  Show description for 02a0f7b
  

  flying-sheep

  and

  ivirshup

  authored
  02a0f7b

Commits on Oct 16, 2023

• Add missing 1.9.6 release notes (scverse#2691)

  flying-sheep

  authored
  27e5f1f

• Fix pandas function deprecation warnings (scverse#2678)

  flying-sheep

  authored
  4e8653e

• Compatibility with Palantir<=v1.3.0 (scverse#2672)

  katosh

  authored
  395f5a2

• allow random state in blobs (scverse#2683)

  Show description for 27f6b56
  

  eroell

  and

  flying-sheep

  authored
  27f6b56

• Loosen exact equality restriction (scverse#2687)

  flying-sheep

  authored
  42e3c2a

• Fix scverse#2681 (scverse#2682)

  Show description for 8353e45
  

  jeskowagner

  and

  flying-sheep

  authored
  8353e45

Commits on Oct 9, 2023

• [pre-commit.ci] pre-commit autoupdate (scverse#2679)

  Show description for 616d580
  pre-commit-ci[bot]

  authored
  616d580

• Fix scatter palette name (scverse#2571)

  Show description for 555b668
  

  flying-sheep

  and

  ivirshup

  authored
  555b668

Commits on Oct 6, 2023

• [pre-commit.ci] pre-commit autoupdate (scverse#2661)

  Show description for 3064bf1
  

  pre-commit-ci[bot]

  and

  flying-sheep

  authored
  3064bf1

Commits on Sep 24, 2023

• Update __init__.py (scverse#2646)

  Show description for 0d4c6d2
  

  yfarjoun

  and

  Zethson

  authored
  0d4c6d2

Commits on Sep 14, 2023

• Harmony 64bit (scverse#2655)

  Show description for 414092f
  Intron7

  authored
  414092f

• Add note to the groups arg in rank_genes_groups() (scverse#2657)

  lazappi

  authored
  8438bd5

Commits on Sep 13, 2023

• Update __init__.py (scverse#2664)

  Intron7

  authored
  1df92d6

Commits on Sep 8, 2023

• Start 1.9.6 (scverse#2660)

  Show description for f3ae7ca
  ivirshup

  authored
  f3ae7ca

• Remove use of AnnData constructor dtype kwarg (scverse#2658)

  Show description for 0b49eeb
  ivirshup

  authored
  0b49eeb

Commits on Sep 5, 2023

• Fix citations in MyST (scverse#2654)

  flying-sheep

  authored
  3a50e60

• Highlight distance matrix in docs of sc.pp.neighbors (scverse#2640)

  eroell

  authored
  037970c

• Fix and deprecate RAPIDS implementations in favor of rapids_singlecell (scverse#2648)

  Show description for 031ee1d
  

  Intron7

  and

  flying-sheep

  authored
  031ee1d

• [pre-commit.ci] pre-commit autoupdate (scverse#2651)

  Show description for 0b34994
  pre-commit-ci[bot]

  authored
  0b34994

Commits on Sep 4, 2023

• Enforce stable cluster order in notebook test (scverse#2650)

  flying-sheep

  authored
  c87f1d6

• Reorganize plotting test outputs (scverse#1772)

  Show description for 1efc3a7
  

  ivirshup

  and

  flying-sheep

  authored
  1efc3a7

Commits on Aug 31, 2023

• Make neighbors work based on KNeighborsTransformer-compatible APIs (scverse#2536)

  Show description for 1fd6c46
  

  flying-sheep

  and

  pre-commit-ci[bot]

  authored
  1fd6c46

Commits on Aug 29, 2023

• [pre-commit.ci] pre-commit autoupdate (scverse#2642)

  Show description for 0bf043c
  pre-commit-ci[bot]

  authored
  0bf043c

Commits on Aug 25, 2023

• Back to scanpydoc (scverse#2561)

  flying-sheep

  authored
  b7a39ab

Commits on Aug 24, 2023

• Prepare 1.9.4 release (scverse#2639)

  flying-sheep

  authored
  ac3008f

• allow sc.pp.subsample in backed mode when returning a copy (scverse#2624)

  Show description for 2de9121
  

  3 peopleauthored
  2de9121

• Improve n_jobs docs (scverse#2637)

  flying-sheep

  authored
  b658b5c

Commits on Aug 22, 2023

• changed hvg with PR to work with numba (scverse#2612)

  Show description for 32a3567
  

  Intron7

  and

  flying-sheep

  authored
  32a3567

• [pre-commit.ci] pre-commit autoupdate (scverse#2631)

  Show description for 607baeb
  pre-commit-ci[bot]

  authored
  607baeb

Commits on Aug 21, 2023

• Dask PCA support (scverse#2563)

  Show description for 2b56e00
  

  selmanozleyen

  and

  flying-sheep

  authored
  2b56e00

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