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This repo includes ChatGPT prompt curation to use ChatGPT and other LLM tools better.

HTML 120,287 16,191 Updated Feb 11, 2025

An advanced guide to learn English which might benefit you a lot 🎉 . 离谱的英语学习指南/英语学习教程。

HTML 37,910 4,175 Updated Jul 13, 2024

A curated list of awesome warez and piracy links

HTML 24,529 2,119 Updated Jun 18, 2023

清华大学计算机系考研攻略 Guidance for postgraduate entrance examination in Department of Computer Science and Technology, Tsinghua University

HTML 2,655 525 Updated Oct 8, 2024

Embeddable genomic visualization component based on the Integrative Genomics Viewer

HTML 663 231 Updated Feb 6, 2025

Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics

HTML 335 76 Updated Jun 4, 2024

glmmTMB

HTML 309 62 Updated Feb 5, 2025

TRAjectory-based Differential Expression analysis for SEQuencing data

HTML 245 28 Updated Jan 27, 2025

Robs manual for the computational genomics and bioinformatics class.

HTML 237 66 Updated Nov 12, 2024

Tool for the Quality Control of Long-Read Defined Transcriptomes

HTML 206 51 Updated Feb 11, 2025

Single cell RNA sequencing analysis course

HTML 200 101 Updated Sep 23, 2024

A centralized location for storing curated data from cBioPortal

HTML 181 121 Updated Feb 7, 2025

The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRNAseq data. However, existing techniques are based on Euclide…

HTML 147 31 Updated Sep 8, 2021

Booyer-Moore-Horspool string search algorithm implementation in C++

HTML 114 19 Updated Oct 13, 2016

STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)

HTML 93 24 Updated Nov 26, 2023

SNV calling from single cell sequencing

HTML 92 19 Updated Nov 11, 2024

CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

HTML 81 31 Updated May 21, 2020

Analysis of convergence between organismal traits and DNA/protein sequences

HTML 50 28 Updated Jan 31, 2025
HTML 44 4 Updated Jan 6, 2025

Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.

HTML 38 9 Updated Jun 6, 2023

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among feat…

HTML 32 8 Updated Jul 12, 2020

Analysis of the human symptoms–disease network

HTML 19 13 Updated Feb 23, 2017

R package for analysis of isoform-diverse transcript datasets

HTML 7 1 Updated Jul 5, 2020

An interactive software for T cell repertoire high-throughput sequencing data analysis

HTML 7 3 Updated Nov 3, 2022

Reproducibility of "Alternative start and termination sites of transcription drive most transcript isoform differences across human tissues."

HTML 4 3 Updated Mar 11, 2019

TSIS: an R package to infer time-series isoform switch of alternative splicing

HTML 3 1 Updated May 11, 2023

Given CA trace in PDB format, restore full atoms

HTML 2 Updated May 30, 2019