FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models

Fast and memory-efficient exact attention

Deep learning embedding for nucleotide sequences

A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework

Ongoing research training transformer models at scale

Data management with LLMs

Development repository for the Triton language and compiler

Orchestrating an Application Process with AWS Batch using AWS CloudFormation

大模型基础: 一文了解大模型基础知识

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

Fully open reproduction of DeepSeek-R1

CUDA Templates for Linear Algebra Subroutines

Streamlining SLAM-seq analysis with ultra-high sensitivity

Learning Large Language Model (LLM）(大语言模型学习)

Fast FASTX parsing and k-mer methods in Rust

一个批量转存、分享和下载夸克网盘文件的工具，可以快速地将大量分享文件转存到到自己的网盘内，或者将网盘文件批量生成分享链接

Generate IGV style locus tracks from bigWig files in R

Structural variation and indel detection by local assembly

MiniCPM-o 2.6: A GPT-4o Level MLLM for Vision, Speech and Multimodal Live Streaming on Your Phone

C++ htslib/bwa-mem/fermi interface for interrogating sequence data

Improved Inference of Ortholog Groups using Hidden Markov Models

Programmable Full-length Transcriptome Sequencing

A modular framework for multimodal cross-cell-type transcriptional regulation models

Analyses of Penter, Borji & Nagler et al., Nature Communications 2024

Deep mutational scanning and mobility-based selection for RNA structure inference

🦀 How to minimize Rust binary size 📦

Hierarchical binned indexed data store for on-disk genomic data.

Reconstructing RNA Dynamics from Data