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Commits on Jul 30, 2017

• removed drone.io

  lh3

  committed
  24a8d66

• moved BWTFree() into BWTIncFree()

  Show description for 89a5c0c
  lh3

  committed
  89a5c0c

• Merge pull request lh3#139 from jmarshall/fixes

  Show description for 0976272
  lh3

  authored
  0976272

• Merge pull request lh3#70 from rmzelle/patch-1

  Show description for a54e769
  lh3

  authored
  a54e769

• Merge pull request lh3#96 from jpfeil/master

  Show description for 31bf49d
  lh3

  authored
  31bf49d

• Merge pull request lh3#123 from bwlang/patch-1

  Show description for 4989736
  lh3

  authored
  4989736

• Merge pull request lh3#141 from jmarshall/bwasw-nan

  Show description for 87ed015
  lh3

  authored
  87ed015

Commits on Jul 4, 2017

• Several trivial Debian patches

  Show description for c56c2e4
  

  tillea

  authored and

  jmarshall

  committed
  c56c2e4

Commits on Jul 3, 2017

• In bsw2_stat(), fail to infer when no pairs are within boundaries

  Show description for bcb475c
  jmarshall

  committed
  bcb475c

Commits on Jun 30, 2017

• Copy the whole kstring_t even if it contains NULs

  Show description for 6906498
  jmarshall

  committed
  6906498

Commits on Jun 29, 2017

• Expand tot_seqs variable to long long

  Show description for a61b1dc
  jmarshall

  committed
  a61b1dc

Commits on Jun 28, 2017

• Update README.md

  Show description for 5ede7eb
  

  rmzelle

  authored and

  jmarshall

  committed
  5ede7eb

Commits on Jun 27, 2017

• Add "bwa mem -o FILE" synonym and documentation

  Show description for bc58bf2
  jmarshall

  committed
  bc58bf2

• Added option to write output to file

  

  José Manuel Abuín Mosquera

  authored and

  jmarshall

  committed
  d28da05

Commits on Jun 26, 2017

• Prevent Clang warnings on abs() and fabs() calls

  Show description for ab3a92b
  jmarshall

  committed
  ab3a92b

Commits on Jun 8, 2017

• Merge branch 'dev'

  lh3

  committed
  05c5013

• r1144: output debugging message to stderr

  lh3

  committed
  298284d

Commits on May 12, 2017

• Fixed BWTIncFree() memory leaks

  Show description for 6a5caf7
  

  GwenIves

  authored and

  jmarshall

  committed
  6a5caf7

Commits on May 10, 2017

• Only realloc(pac,...) if it needs to be made larger

  Show description for 1972a97
  jmarshall

  committed
  1972a97

Commits on Apr 27, 2017

• updates grch38 URL

  Show description for 6442d00
  bwlang

  authored
  6442d00

Commits on Apr 25, 2017

• Add missing <stdint.h> include

  Show description for beff2e2
  jmarshall

  committed
  beff2e2

• Replace u_int32_t by the more common uint32_t

  Show description for af87825
  jmarshall

  committed
  af87825

Commits on Nov 9, 2016

• Add -M option to bwakit

  jpfeil

  committed
  9dfb970

Commits on Jun 10, 2016

• Update README.md

  Show description for 00e59dd
  rmzelle

  authored
  00e59dd

Commits on May 31, 2016

• Merge branch 'dev'

  lh3

  committed
  5961611

• r1142: added option -5 for Hi-C data

  lh3

  committed
  f123871

• Merge branch 'dev'

  lh3

  committed
  0876421

• Release bwa-0.7.15-r1140

  lh3

  committed
  850dd81

Commits on May 20, 2016

• Merge branch 'dev'

  lh3

  committed
  bdfb9ef

• r1138: fixed typo in insert size estimate (lh3#65)

  Show description for 58bcc25
  lh3

  committed
  58bcc25

Commits on May 4, 2016

• Merge branch 'dev'

  lh3

  committed
  ee730f3

• Release 0.7.14-r1136

  lh3

  committed
  5db0c36

Commits on May 3, 2016

• Merge branch 'dev'

  lh3

  committed
  fe545f6

• r1134: use AH:* instead of AH:Y

  lh3

  committed
  7ec3261

Commits on Apr 28, 2016

• Merge branch 'master' of github.com:lh3/bwa

  lh3

  committed
  6b9be61

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