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@KChen-lab

KChen-lab

Popular repositories Loading

  1. Monopogen Monopogen Public

    SNV calling from single cell sequencing

    HTML 85 19

  2. METAFlux METAFlux Public

    HTML 50 9

  3. bindSC bindSC Public

    Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data

    R 34 7

  4. SCMER SCMER Public

    Marker Selection by matching manifolds and elastic net

    HTML 23 4

  5. Texomer Texomer Public

    Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data

    R 20 8

  6. Cyclum Cyclum Public

    Identify circular trajectories in scRNA-seq data using an autoencoder with sinusoidal activations

    Python 20 4

Repositories

Showing 10 of 33 repositories
  • HTML 0 0 0 0 Updated Dec 14, 2024
  • Monopogen Public

    SNV calling from single cell sequencing

    HTML 85 GPL-3.0 19 49 (1 issue needs help) 1 Updated Nov 11, 2024
  • Jupyter Notebook 7 MIT 2 1 0 Updated Nov 2, 2024
  • SCMER Public

    Marker Selection by matching manifolds and elastic net

    HTML 23 MIT 4 0 0 Updated Oct 22, 2024
  • INVAX_manuscript Public

    Scripts/Codes for INVAX project paper

    R 0 Apache-2.0 0 0 0 Updated Oct 19, 2024
  • LSGI Public
    HTML 1 3 0 0 Updated Sep 6, 2024
  • METAFlux Public
    HTML 50 9 15 0 Updated Jun 29, 2024
  • lad Public Forked from KChen-lab/bcd

    Visualization and analysis of single-cell RNA-seq data by alternative clustering

    Jupyter Notebook 0 2 0 0 Updated Feb 11, 2024
  • bcd Public

    Visualization and analysis of single-cell RNA-seq data by alternative clustering

    HTML 4 2 1 0 Updated Nov 23, 2023
  • NK_CEBPD_manuscript Public

    Scripts/Codes for NK CEBPD paper

    R 1 0 0 0 Updated Nov 20, 2023

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