MAINT: Test against pymatreader dev version (mne-tools#12770)

examples/inverse/morph_volume_stc.py

@@ -16,9 +16,9 @@
 (brain) to `FreeSurfer's 'fsaverage' T1 weighted MRI (brain)
 <https://surfer.nmr.mgh.harvard.edu/fswiki/FsAverage>`__.
 
-Afterwards the transformation will be applied to the volumetric source
-estimate. The result will be plotted, showing the fsaverage T1 weighted
-anatomical MRI, overlaid with the morphed volumetric source estimate.
+Afterwards the transformation will be applied to the volumetric source estimate. The
+result will be plotted, showing the fsaverage T1 weighted anatomical MRI, overlaid with
+the morphed volumetric source estimate.
 """
 # Author: Tommy Clausner <[email protected]>
 #

tools/circleci_dependencies.sh

@@ -1,10 +1,15 @@
 #!/bin/bash -ef
 
 python -m pip install --upgrade "pip!=20.3.0" build
-# https://github.com/dipy/dipy/issues/3265 for numpy, dipy
+# This can be removed once dipy > 1.9.0 is released
+python -m pip install --upgrade --progress-bar off \
+    numpy scipy h5py
+python -m pip install --pre --progress-bar off \
+    --extra-index-url "https://pypi.anaconda.org/scientific-python-nightly-wheels/simple" \
+    "dipy>1.9"
 python -m pip install --upgrade --progress-bar off \
     --only-binary "numpy,dipy,scipy,matplotlib,pandas,statsmodels" \
-    -ve .[full,test,doc] "numpy==1.26.4" "dipy!=1.9.0" \
+    -ve .[full,test,doc] "numpy>=2" \
     "git+https://github.com/larsoner/pyvista.git@refcycle" \
     git+https://github.com/sphinx-gallery/sphinx-gallery.git \
     \

tools/install_pre_requirements.sh

@@ -29,11 +29,13 @@ python -m pip install $STD_ARGS --only-binary ":all:" --default-timeout=60 \
 	"statsmodels>=0.15.0.dev0" "pandas>=3.0.0.dev0" "matplotlib>=3.10.0.dev0" \
 	$OTHERS
 
-# Wait for
-pip install --pre --upgrade statsmodels
-
 # No Numba because it forces an old NumPy version
 
+if [[ "${PLATFORM}" == "Linux" ]]; then
+	echo "pymatreader"
+	pip install https://gitlab.com/obob/pymatreader/-/archive/master/pymatreader-master.zip
+fi
+
 echo "OpenMEEG"
 python -m pip install $STD_ARGS --only-binary ":all:" --extra-index-url "https://test.pypi.org/simple" "openmeeg>=2.6.0.dev4"