Skip to content

Commit

Permalink
Organize news section (scverse#1345)
Browse files Browse the repository at this point in the history
* briefer statement

* add news file

* less wordy

* fix articles
  • Loading branch information
falexwolf authored Jul 30, 2020
1 parent 2f160ea commit fc01716
Show file tree
Hide file tree
Showing 2 changed files with 23 additions and 10 deletions.
14 changes: 4 additions & 10 deletions docs/index.rst
Original file line number Diff line number Diff line change
Expand Up @@ -10,26 +10,20 @@
* Discuss usage on Discourse_ and development on GitHub_.
* Get started by browsing :doc:`tutorials <tutorials>`,
:doc:`usage principles <usage-principles>` or the main :doc:`API <api/index>`.
* If Scanpy is useful for your research, consider citing `Genome Biology (2018)`_ along with original :doc:`references <references>`.
* Follow changes in the :doc:`release notes <release-notes>`.
* Find tools that harmonize well with anndata & Scanpy via the
:doc:`external API <external/index>` and the :doc:`ecosystem page <ecosystem>`.
* Consider citing `Genome Biology (2018)`_ along with original :doc:`references <references>`.

.. _Discourse: https://scanpy.discourse.group/
.. _GitHub: https://github.com/theislab/scanpy
.. _Genome Biology (2018): https://doi.org/10.1186/s13059-017-1382-0


News - CZI grant :small:`2019-11-14`
------------------------------------
News
----

Scanpy has been selected an `essential open source software for science`_ by
CZI among `32 projects`_, along with giants such as Scipy, Numpy, Pandas,
Matplotlib, scikit-learn, scikit-image/plotly, pip, jupyterhub/binder,
Bioconda, Seurat, Bioconductor, and others.

.. _essential open source software for science: https://chanzuckerberg.com/newsroom/chan-zuckerberg-initiative-awards-5-million-for-open-source-software-projects-essential-to-science/
.. _32 projects: https://chanzuckerberg.com/eoss/proposals/
.. include:: news.rst


Latest additions
Expand Down
19 changes: 19 additions & 0 deletions docs/news.rst
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
.. role:: small


COVID-19 datasets distributed as `h5ad` :small:`2020-04-01`
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

In a joint initiative, the Wellcome Sanger Institute, the Human Cell Atlas, and the CZI distribute datasets related to COVID-19 via anndata's `h5ad` files: `covid19cellatlas.org <https://www.covid19cellatlas.org/>`__. It wasn't anticipated that the `initial idea <https://falexwolf.de/blog/2017-12-23-anndata-indexing-views-HDF5-backing/>`__ of sharing and backing an on-disk representation of `AnnData` would become so widely adopted. Curious? Read up more on the `format <https://anndata.readthedocs.io/en/latest/fileformat-prose.html>`__.


CZI grant :small:`2019-11-14`
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Scanpy has been selected an `essential open source software for science`_ by
CZI among `32 projects`_, along with giants such as Scipy, Numpy, Pandas,
Matplotlib, scikit-learn, scikit-image/plotly, pip, jupyterhub/binder,
Bioconda, Seurat, Bioconductor, and others.

.. _essential open source software for science: https://chanzuckerberg.com/newsroom/chan-zuckerberg-initiative-awards-5-million-for-open-source-software-projects-essential-to-science/
.. _32 projects: https://chanzuckerberg.com/eoss/proposals/

0 comments on commit fc01716

Please sign in to comment.