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---
title: Landscape of R packages for eXplainable Artificial Intelligence
output: gtihub_document
output: html_document
---

This repository is a landing page for the article: [Szymon Maksymiuk](https://www.linkedin.com/in/szymon-maksymiuk/), [Alicja Gosiewska](https://www.linkedin.com/in/alicja-gosiewska/), and [Przemysław Biecek](https://www.linkedin.com/in/pbiecek/). *Landscape of R packages for eXplainable Artificial Intelligence*. It contains data and code necessary to reproduce all analysis made in the paper.
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<center><font size="+2">
<a href="https://mi2datalab.github.io/XAI-tools/ALEplot.html">ALEplot</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/arules.html">arules</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/auditor.html">auditor</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/ctree.html">ctree</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/DALEX.html">DALEX</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/DALEXtra.html">DALEXtra</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/EIX.html">EIX</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/ExplainPrediction.html">ExplainPrediction</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/fairness.html">fairness</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/fastshap.html">fastshap</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/flashlight.html">flashlight</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/forestmodel.html">forestmodel</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/fscaret.html">fscaret</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/glmnet.html">glmnet</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/iBreakDown.html">iBreakDown</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/ICEbox.html">ICEbox</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/iml.html">iml</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/ingredients.html">ingredients</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/kknn.html">kknn</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/naivebayes.html">naivebayes</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/lime.html">lime</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/live.html">live</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/mcr.html">mcr</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/modelDown.html">modelDown</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/modelStudio.html">modelStudio</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/pdp.html">pdp</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/randomForestExplainer.html">randomForestExplainer</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/shapper.html">shapper</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/smbinning.html">smbinning</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/survxai.html">survxai</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/vip.html">vip</a> </br>
<a href="https://mi2datalab.github.io/XAI-tools/vivo.html">vivo</a> </br>
</font></center>

| | | | | |
|---------------------------------------------------------------------------------------|-----------------------------|---------------------------------------------------------------------------------------------------|-----------------------------|-----------------------------------------------------------------------------------------------------------|
| <a href="https://mi2datalab\.github\.io/XAI\-tools/ALEplot\.html">ALEplot</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/arules\.html">arules</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/auditor\.html">auditor</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/ctree\.html">ctree</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/DALEX\.html">DALEX</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/DALEXtra\.html">DALEXtra</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/EIX\.html">EIX</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/ExplainPrediction\.html">ExplainPrediction</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/fairness\.html">fairness</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/fastshap\.html">fastshap</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/flashlight\.html">flashlight</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/forestmodel\.html">forestmodel</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/fscaret\.html">fscaret</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/glmnet\.html">glmnet</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/iBreakDown\.html">iBreakDown</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/ICEbox\.html">ICEbox</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/iml\.html">iml</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/ingredients\.html">ingredients</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/kknn\.html">kknn</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/naivebayes\.html">naivebayes</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/lime\.html">lime</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/live\.html">live</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/mcr\.html">mcr</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/modelDown\.html">modelDown</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/modelStudio\.html">modelStudio</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/pdp\.html">pdp</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/randomForestExplainer\.html">randomForestExplainer</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/shapper\.html">shapper</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/smbinning\.html">smbinning</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/survxai\.html">survxai</a> |
| <a href="https://mi2datalab\.github\.io/XAI\-tools/vip\.html">vip</a> | &nbsp; &nbsp; &nbsp; &nbsp; | <a href="https://mi2datalab\.github\.io/XAI\-tools/vivo\.html">vivo</a> | &nbsp; &nbsp; &nbsp; &nbsp; | |

</font></center>
<center>
```{r echo=FALSE, fig.cap="Partial Dependence Porfiles for fare variable from the Titanic data set generated with DALEX(top-left), flashlight(right-top), iml(left-bottom), pdp(right-bottom). We can see that the profiles differs. It is due to the fact that profiles are evaluated on different grids of points.", fig.show='hold'}
knitr::include_graphics("./figures/pdps.png")
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84 changes: 83 additions & 1 deletion docs/index.html
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Expand Up @@ -388,7 +388,89 @@ <h1>Proposed taxonomy</h1>
<h1>Packages demo</h1>
<p>During the work under the article, we have created a markdown with an example of usage of every compared package. The results can be seen below. As teaser figures used in the article are presented.</p>
<center>
<font size="+2"> <a href="https://mi2datalab.github.io/XAI-tools/ALEplot.html">ALEplot</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/arules.html">arules</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/auditor.html">auditor</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/ctree.html">ctree</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/DALEX.html">DALEX</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/DALEXtra.html">DALEXtra</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/EIX.html">EIX</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/ExplainPrediction.html">ExplainPrediction</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/fairness.html">fairness</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/fastshap.html">fastshap</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/flashlight.html">flashlight</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/forestmodel.html">forestmodel</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/fscaret.html">fscaret</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/glmnet.html">glmnet</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/iBreakDown.html">iBreakDown</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/ICEbox.html">ICEbox</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/iml.html">iml</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/ingredients.html">ingredients</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/kknn.html">kknn</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/naivebayes.html">naivebayes</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/lime.html">lime</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/live.html">live</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/mcr.html">mcr</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/modelDown.html">modelDown</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/modelStudio.html">modelStudio</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/pdp.html">pdp</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/randomForestExplainer.html">randomForestExplainer</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/shapper.html">shapper</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/smbinning.html">smbinning</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/survxai.html">survxai</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/vip.html">vip</a> </br> <a href="https://mi2datalab.github.io/XAI-tools/vivo.html">vivo</a> </br> </font>
<p><font size="+2"></p>
<table>
<tbody>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/ALEplot\.html">ALEplot</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/arules\.html">arules</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/auditor\.html">auditor</a></td>
</tr>
<tr class="even">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/ctree\.html">ctree</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/DALEX\.html">DALEX</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/DALEXtra\.html">DALEXtra</a></td>
</tr>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/EIX\.html">EIX</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/ExplainPrediction\.html">ExplainPrediction</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/fairness\.html">fairness</a></td>
</tr>
<tr class="even">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/fastshap\.html">fastshap</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/flashlight\.html">flashlight</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/forestmodel\.html">forestmodel</a></td>
</tr>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/fscaret\.html">fscaret</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/glmnet\.html">glmnet</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/iBreakDown\.html">iBreakDown</a></td>
</tr>
<tr class="even">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/ICEbox\.html">ICEbox</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/iml\.html">iml</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/ingredients\.html">ingredients</a></td>
</tr>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/kknn\.html">kknn</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/naivebayes\.html">naivebayes</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/lime\.html">lime</a></td>
</tr>
<tr class="even">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/live\.html">live</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/mcr\.html">mcr</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/modelDown\.html">modelDown</a></td>
</tr>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/modelStudio\.html">modelStudio</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/pdp\.html">pdp</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/randomForestExplainer\.html">randomForestExplainer</a></td>
</tr>
<tr class="even">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/shapper\.html">shapper</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/smbinning\.html">smbinning</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/survxai\.html">survxai</a></td>
</tr>
<tr class="odd">
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/vip\.html">vip</a></td>
<td>       </td>
<td><a href="https://mi2datalab\.github\.io/XAI\-tools/vivo\.html">vivo</a></td>
<td>       </td>
<td></td>
</tr>
</tbody>
</table>
</font>
</center>
<center>
<div class="figure">
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