MISC: cosmit in example

MartinPerez · May 13, 2015 · 5f67862 · 5f67862
1 parent 602f5bd
commit 5f67862
Showing 1 changed file with 11 additions and 12 deletions.
diff --git a/examples/plot_localizer_analysis.py b/examples/plot_localizer_analysis.py
@@ -66,10 +66,20 @@
 ax.set_title('Design matrix')
 plt.savefig(path.join(write_dir, 'design_matrix.png'))
 
+########################################
+# Perform a GLM analysis
+########################################
+
+fmri_glm = FMRILinearModel(epi_img,
+                           design_matrix.matrix, mask='compute')
+fmri_glm.fit(do_scaling=True, model='ar1')
+
 #########################################
-# Specify the contrasts
+# Estimate contrasts
 #########################################
 
+# Specify the contrasts
+
 # simplest ones
 contrasts = {}
 n_columns = len(design_matrix.names)
@@ -94,17 +104,6 @@
 contrasts["reading-visual"] = contrasts["sentences"] * 2 - \
                               contrasts["damier_H"] - contrasts["damier_V"]
 
-########################################
-# Perform a GLM analysis
-########################################
-
-fmri_glm = FMRILinearModel(epi_img,
-                           design_matrix.matrix, mask='compute')
-fmri_glm.fit(do_scaling=True, model='ar1')
-
-#########################################
-# Estimate the contrasts
-#########################################
 
 for index, (contrast_id, contrast_val) in enumerate(contrasts.items()):
     print('  Contrast % 2i out of %i: %s' %