Fix scratch option for eddie custom configuration

MazdaX · Oct 14, 2021 · 9f68138 · 9f68138
1 parent 182d714
commit 9f68138
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/conf/eddie.config b/conf/eddie.config
@@ -19,7 +19,7 @@ executor {
 
 process {
   clusterOptions = { task.memory ? "-l h_vmem=${task.memory.bytes/task.cpus} ${params.extra_cluster_options}" : null }
-  scratch = $params.scratch
+  scratch = params.scratch
   penv = { task.cpus > 1 ? "sharedmem" : null }
 
   // common SGE error statuses

diff --git a/conf/eddie_conda.config b/conf/eddie_conda.config
@@ -19,7 +19,7 @@ executor {
 
 process {
   clusterOptions = { task.memory ? "-l h_vmem=${task.memory.bytes/task.cpus} ${params.extra_cluster_options}" : null }
-  scratch = $params.scratch
+  scratch = params.scratch
   penv = { task.cpus > 1 ? "sharedmem" : null }
 
   // common SGE error statuses