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Commits on Jan 15, 2020

• feat: remove if for matrix test in orderSimilarityMatrix

  tnaake

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• feat: add test for orderSimilarityMatrix

  tnaake

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• tests: put diag(similarityMatrix) <- 1 in orderSimilarityMatrix later

  tnaake

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• tests: change createOrderedSimMat to orderSimilarityMatrix

  tnaake

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Commits on Jan 14, 2020

• docs: fix error Variables with usage in documentation object 'spectra_tissue' but not in code

  tnaake

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• docs: fix error Variables with usage in documentation object convertExampleDF but not in code

  tnaake

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• docs: add circos.clear() before running circos.par()

  tnaake

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Commits on Oct 22, 2019

• docs: delete superflous spaces

  tnaake

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• docs: remove superflous spaces

  tnaake

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Commits on Sep 24, 2019

• delete trailing whitespaces and insert spaces around =

  tnaake

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Commits on Sep 2, 2019

• fix, add function select to externalize from shinyCircos

  tnaake

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• man, update documentation for recordPlotFill_degreeFeatures in .R

  tnaake

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Commits on Sep 1, 2019

• fix, externalize steps in shinyCircos to functions

  tnaake

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Commits on Aug 31, 2019

• fix, shorten variables in shinyCircos

  tnaake

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• fix, externalise steps in shinyCircos to functions

  tnaake

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Commits on Aug 30, 2019

• test, improve codecov for test_shinyApp.R

  tnaake

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• test, improve coverage for test_plottingFunctions.R

  tnaake

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• test, improve test coverage for test_linkDf.R

  tnaake

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• man, fix examples and improve documentation in .R files

  tnaake

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• fix, fix data import

  tnaake

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• man, change documentation in .R files

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Commits on Aug 29, 2019

• add ggplot2 in dependencies

  tnaake

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Commits on Aug 19, 2019

• push to version 1.15.0, use MSnbase Spectrum objects

  tnaake

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Commits on Jul 15, 2019

• remove allocatePrecursor2mz and unittests

  tnaake

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Commits on Apr 25, 2019

• add man for compare_Spectra

  tnaake

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• update functions that they can use MSnbase objects

  tnaake

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• remove unnecessary files that depend on MSP object

  tnaake

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• add function to plot MS/MS spectra in shinyCircos

  tnaake

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• implement that MetCirc uses MSnbase Spectra and Spectrum2 objecs

  tnaake

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• add function convertMsp2Spectra and data file

  tnaake

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Commits on Jul 14, 2018

• use BiocManager instead of BiocLite for instalation

  tnaake

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Commits on Nov 14, 2017

• merge conflict

  tnaake

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• update to 1.7.0

  tnaake

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• allow m=0 in NDP calculation

  tnaake

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Commits on Oct 19, 2017

• bump to version 1.3.0

  tnaake

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