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@ModelSEED

ModelSEED

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  1. ModelSEEDDatabase ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    HTML 58 40

  2. ModelSEEDpy ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    Python 20 17

  3. Model-SEED-core Model-SEED-core Public archive

    The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.

    Perl 19 11

  4. ModelSEED-UI ModelSEED-UI Public

    ModelSEED UI (beta)

    HTML 8 7

  5. PlantSEED PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    Perl 6 8

  6. ModelSeedApi ModelSeedApi Public

    Application Programming Interface to the Model Seed

    Perl 4 2

Repositories

Showing 10 of 46 repositories
  • KB-ModelSEEDReconstruction Public
    ModelSEED/KB-ModelSEEDReconstruction’s past year of commit activity
    Python 3 MIT 1 0 0 Updated Dec 28, 2024
  • ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    ModelSEED/ModelSEEDDatabase’s past year of commit activity
    HTML 58 40 23 2 Updated Dec 19, 2024
  • PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    ModelSEED/PlantSEED’s past year of commit activity
    Perl 6 8 13 0 Updated Dec 11, 2024
  • MicrobiomeNotebooks Public
    ModelSEED/MicrobiomeNotebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 9, 2024
  • ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    ModelSEED/ModelSEEDpy’s past year of commit activity
    Python 20 MIT 17 6 4 Updated Nov 29, 2024
  • KBaseNotebooks Public
    ModelSEED/KBaseNotebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 5, 2024
  • editEscher Public

    A library for editing Escher Metabolic Network maps

    ModelSEED/editEscher’s past year of commit activity
    0 0 0 0 Updated Oct 25, 2024
  • ModelSEED2Notebooks Public
    ModelSEED/ModelSEED2Notebooks’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Oct 8, 2024
  • AGORA2_genomes Public

    The genomes associated with the AGORA2 gut microbiome models

    ModelSEED/AGORA2_genomes’s past year of commit activity
    0 0 0 0 Updated Sep 11, 2024
  • MSGoogleColab Public
    ModelSEED/MSGoogleColab’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Sep 4, 2024
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