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This repository contains the analysis and code for investigating cutaneous melanoma (SKCM) through RNA-seq, miRNA expression, and multi-omics integration. The project uses DESeq2, GProfiler, GSEA, …

R 1 Updated Dec 26, 2024

Hereditary Angioedema Database Annotation

3 3 Updated Jul 3, 2024

Structural variant and indel caller for mapped sequencing data

C++ 418 152 Updated Dec 21, 2022

Documentation for the ANNOVAR software

236 372 Updated Oct 24, 2024

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

Python 190 93 Updated May 28, 2023

😎 Awesome lists about all kinds of interesting topics

344,514 28,387 Updated Dec 12, 2024

✅ Curated list of resources for college students

17,890 4,545 Updated Jan 16, 2025

Workflows for germline short variant discovery with GATK4

WDL 133 56 Updated May 7, 2021

Streamlining dataset analysis and primer design for efficient genetic studies. Our Project is driven by robust algorithms, aims to achieve quick and accurate results. Leveraging Muscle alignment an…

Python 3 Updated Dec 26, 2024

This project delves into the computational analysis of lung and kidney cancer gene expressions, identifying differentially expressed genes and exploring their copy number variation relationships. T…

R 1 Updated Aug 20, 2024

Unlocking the genetic secrets of HIV-1! 🚀 Dive into our computational analysis comparing virus sequences from Africa and Europe. Discover dissimilar regions, analyze functional products, and explor…

Python 1 Updated Dec 26, 2024

DFAST Quality Control: Taxonomy and completeness check

Python 15 3 Updated Jan 14, 2025

Config files for my GitHub profile.

1 Updated Jan 11, 2024