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H2Former

This repository contains the implementation of our paper "H2Former: An Efficient Hierarchical Hybrid Transformer for Medical Image Segmentation"

Requirements

python 3.6

numpy 1.16.4

Pytorch 1.8.1

pillow 7.0.0

opencv-python 4.1.0

Usage

  1. Clone the repository, and download the pre-trained ImaenNet model, put them into ./ folder. The details of the training are in train.py file.

  2. And then run the code:python train.py Note that the parameters and paths should be set beforehand

  3. Once the training is complete, you can run the test.py to test your model. Run the code : python test.py.

LICENSE

Code can only be used for ACADEMIC PURPOSES. NO COMERCIAL USE is allowed. Copyright © College of Computer Science, Nankai University. All rights reserved.

Note

数据训练的.txt文件只是文件名,代表的是哪些文件是训练集,哪些是测试集,代码中只是给了一个示例,具体的读取还是通过对数据的标签、图像直接读取。 四种病变的标签是放在同一个mask中,跟普通语义分割一样,四种病变用1,2,3,4代表就行,背景用0代表就可以。

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