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correct enhancer config to match article
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r-trimbour committed Nov 21, 2023
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2 changes: 1 addition & 1 deletion hummuspy/pyproject.toml
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@@ -1,6 +1,6 @@
[tool.poetry]
name = "hummuspy"
version = "0.0.45"
version = "0.0.47"
description = "HuMMuS is a novel method for the inference of regulatory mechanisms from multi-omics data with any type and number of omics, through a heterogeneous multilayer network framework."
authors = ["Rémi Trimbour <[email protected]>"]
license = "GPL-3.0-only"
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1 change: 0 additions & 1 deletion hummuspy/src/hummuspy/config.py
Original file line number Diff line number Diff line change
Expand Up @@ -556,7 +556,6 @@ def get_enhancers_lamb(config,
print(lamb)

# Add proba between peaks and RNA layers
lamb.loc[peak_multiplex, rna_multiplex] = 1
lamb.loc[peak_multiplex, peak_multiplex] = 1
lamb.loc[rna_multiplex, peak_multiplex] = 1
lamb.loc[tf_multiplex, peak_multiplex] = 1
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