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Commits on Oct 11, 2024

• Changed input parameters to select databases (galaxyproject#558)

  clsiguret

  authored
  b583eb3

• Changed input parameters to select databases (galaxyproject#560)

  clsiguret

  authored
  fbc9fe4

• Updating workflows/bacterial_genomics/amr_gene_detection from 1.1.3 to 1.1.4 (galaxyproject#561)

  Show description for b36a362
  clsiguret

  authored
  b36a362

Commits on Oct 2, 2024

• Fix test

  clsiguret

  committed
  4cf41e9

• Updating workflows/bacterial_genomics/bacterial_genome_annotation from 1.1.4 to 1.1.5 (galaxyproject#547)

  Show description for 838d46d
  

  clsiguret

  and

  planemo-autoupdate

  authored
  838d46d

• Updating workflows/genome-assembly/quality-and-contamination-control from 1.1.2 to 1.1.3 (galaxyproject#546)

  Show description for 1b9144f
  

  clsiguret

  and

  planemo-autoupdate

  authored
  1b9144f

Commits on Sep 27, 2024

• Fix test

  clsiguret

  committed
  e36b2ba

• Fix has_text tests syntax

  clsiguret

  committed
  a712636

• Fix test for 5 outputs

  clsiguret

  committed
  af8513c

• Fix test syntax

  clsiguret

  committed
  f4314b8

• Fix test syntax

  clsiguret

  committed
  62a3cf9

• Removed 1.1.3 bump

  clsiguret

  committed
  5560926

• Fix test for shovill_contigs_graph

  clsiguret

  committed
  0bbaa71

Commits on Sep 19, 2024

• Change tool versions in ToolDistillator parameters (galaxyproject#522)

  clsiguret

  authored
  7907910

• Change tool versions in ToolDistillator parameters (galaxyproject#523)

  clsiguret

  authored
  e1b2f11

• Change percent identity threshold in StarAMR (galaxyproject#521)

  clsiguret

  authored
  d502dc3

Commits on Sep 18, 2024

• Quality and contamination control workflow update from 1.1.1 to 1.1.2 (galaxyproject#520)

  Show description for 34c8296
  

  clsiguret

  and

  planemo-autoupdate

  authored
  34c8296

Commits on Jul 19, 2024

• PlasmidFinder database correction in .ga

  clsiguret

  authored
  89760ed

• PlasmidFinder database correction in .ga

  clsiguret

  authored
  2bc8326

Commits on Jun 18, 2024

• Change Bakta database to 'V5.0_2023-02-20'

  clsiguret

  authored
  5eacf3b

Commits on Jun 17, 2024

• Update .dockstore.yml

  clsiguret

  authored
  9d02e6d

• Update .dockstore.yml

  clsiguret

  authored
  1953502

• Update workflows/bacterial_genomics/quality_and_contamination_control/quality_and_contamination_control-tests.yml

  Show description for 85c8431
  

  clsiguret

  and

  mvdbeek

  authored
  85c8431

• Update workflows/bacterial_genomics/quality_and_contamination_control/quality_and_contamination_control-tests.yml

  Show description for 70cf8e9
  

  clsiguret

  and

  mvdbeek

  authored
  70cf8e9

• Update workflows/bacterial_genomics/quality_and_contamination_control/quality_and_contamination_control.ga

  Show description for 89d24c3
  

  clsiguret

  and

  mvdbeek

  authored
  89d24c3

• Add + Change PlasmidFinder database

  clsiguret

  committed
  9e61a18

Commits on Jun 14, 2024

• Update files + add [...].ga and .dockstore.yml

  clsiguret

  committed
  a16ef24

Commits on Jun 13, 2024

• Add commit suggestions + reviews from @mvdbeek and @wm75

  clsiguret

  committed
  c5f5a84

• Add commit suggestions + reviews from @mvdbeek and @wm75

  clsiguret

  committed
  5d44470

• Add commit suggestions + reviews from @mvdbeek and @wm75

  clsiguret

  committed
  ddc014c

• Add commit suggestions + reviews from @mvdbeek and @wm75

  clsiguret

  committed
  eeabaf9

Commits on Jun 6, 2024

• Add 'Bacterial genome annotation' workflow

  clsiguret

  committed
  4c4db1a

Commits on Jun 5, 2024

• add .dockstore.yml

  clsiguret

  committed
  6d4c585

• Add 'AMR gene detection' subworkflow

  clsiguret

  committed
  1458efc

• add .dockstore.yml

  clsiguret

  committed
  1731a72

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