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Commits on May 11, 2022

• Update index.html

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• Delete CNAME

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• Create CNAME

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• Delete CNAME

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• Create CNAME

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Commits on Jul 5, 2019

• version bump

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• update to source control docs

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• updated docs for plotHeatmap function

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Commits on Jun 12, 2019

• remove "Package 'seqplots' is deprecated and will be removed from Bioconductor version 3.11" message

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• correct version

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• Merge remote-tracking branch 'upstream/master'

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• fixed vignette

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Commits on May 6, 2019

• fixed sorting

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Commits on Sep 14, 2018

• version bump to 1.19.3

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• Merge branch 'master' of git.bioconductor.org:packages/seqplots

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• clusters are properly assigned in single thread mode, fixes #38

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Commits on Sep 13, 2018

• use single core calculations by default, fixes #43

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Commits on May 2, 2018

• remove test for unused features

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• add parameter to determine sorting distance

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Commits on May 1, 2018

• heatmap plotting function takes options to sort by specific tracks, sort by anchored distance and cluster based on anchored distance, and annotate clusters using external vector

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Commits on Mar 1, 2018

• removed "library' or 'require' calls for: ‘BSgenome’ ‘RSQLite’ ‘rtracklayer’

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Commits on Feb 28, 2018

• export for getREF function

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Commits on Jan 27, 2018

• getPlotSetArray: if track list is named, use the names instead of paths to annotate the output

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Commits on Jan 9, 2018

• add_local_file - function to add files to local SeqPlots installation

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Commits on Nov 2, 2017

• docs update

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Commits on Sep 27, 2017

• further support for chromosome check for genomes in FASTA files - TODO: add support for motif plots

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• support for uploading narrowPeak files

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• docs update

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• Import function for narrowPeak format

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• use FASTA genomes for uploaded files

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• Logic for adding FASTA files in GUI

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Commits on Sep 20, 2017

• Merge branch 'master' of github.com:Przemol/seqplots

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• adding BW files from Query String - bugfix

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• adding BW files from Query String - get metadata info from query string

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• adding BW files from Query String - error handling

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