Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning

Scripts to benchmark and train foldseek

Vector Quantized VAEs - PyTorch Implementation

Official implementation of "Learning the language of protein structures"

AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt pretrained models and generate finetuned models for downstr…

[NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models

Code for the ProteinMPNN paper

This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".

Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.

LLM对话生成工具

Genomics-FM

Foldseek enables fast and sensitive comparisons of large structure sets.

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

Open-sourced codes for MiniGPT-4 and MiniGPT-v2 (https://minigpt-4.github.io, https://minigpt-v2.github.io/)

Saprot: Protein Language Model with Structural Alphabet (AA+3Di)

Grounded Language-Image Pre-training

Chatbot Arena meets multi-modality! Multi-Modality Arena allows you to benchmark vision-language models side-by-side while providing images as inputs. Supports MiniGPT-4, LLaMA-Adapter V2, LLaVA, B…

The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"

Protein Graph Library

A chatbot platform that can support multiple models from different manufacturers。

FastGPT is a knowledge-based platform built on the LLMs, offers a comprehensive suite of out-of-the-box capabilities such as data processing, RAG retrieval, and visual AI workflow orchestration, le…

A Text-guided Protein Design Framework, Nat Mach Intell 2025

整理开源的中文大语言模型，以规模较小、可私有化部署、训练成本较低的模型为主，包括底座模型，垂直领域微调及应用，数据集与教程等。

[ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts

InternLM-XComposer2.5-OmniLive: A Comprehensive Multimodal System for Long-term Streaming Video and Audio Interactions

Code for ALBEF: a new vision-language pre-training method

LLM相关论文清单，每篇论文包含一个简要的概述

The paper list of the 86-page paper "The Rise and Potential of Large Language Model Based Agents: A Survey" by Zhiheng Xi et al.