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RabbitBio

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  1. RabbitTClust RabbitTClust Public

    RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches

    C++ 45 4

  2. RabbitQCPlus RabbitQCPlus Public

    A more efficient quality control tool for sequencing data

    C++ 25 2

  3. RabbitKSSD RabbitKSSD Public

    RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures

    C++ 10 1

  4. RabbitFX RabbitFX Public

    C++ 9 2

  5. RabbitV RabbitV Public

    RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures

    C++ 8 1

  6. RabbitTrim RabbitTrim Public

    C++ 4

Repositories

Showing 10 of 24 repositories
  • RabbitSketch Public Forked from ZekunYin/RabbitSketch

    fast sketch for DNA or normal sequence data (MinHash WeightedMinHash OrderMinHash and hyperloglog)

    RabbitBio/RabbitSketch’s past year of commit activity
    C++ 3 1 0 0 Updated Dec 24, 2024
  • SWBWA Public Forked from yanlifeng/bwa-SW9A

    BWA on Sunway platform

    RabbitBio/SWBWA’s past year of commit activity
    C 1 GPL-3.0 561 0 0 Updated Dec 23, 2024
  • SWBAM Public Forked from RabbitBio/RabbitBAM

    Ultra-fast I/O framework for BAM files on Sunway

    RabbitBio/SWBAM’s past year of commit activity
    C 1 1 0 0 Updated Nov 27, 2024
  • RabbitBAM-SORT Public

    Efficient BAM file sorting with RabbitBAM I/O library

    RabbitBio/RabbitBAM-SORT’s past year of commit activity
    C++ 0 0 0 0 Updated Nov 5, 2024
  • RabbitBAM Public

    Ultra-fast I/O framework for BAM files

    RabbitBio/RabbitBAM’s past year of commit activity
    C 2 1 0 0 Updated Nov 5, 2024
  • RabbitQCPlus Public

    A more efficient quality control tool for sequencing data

    RabbitBio/RabbitQCPlus’s past year of commit activity
    C++ 25 MIT 2 0 0 Updated Nov 3, 2024
  • RabbitBAM-QC Public

    Efficient QC for BAM files with RabbitBAM I/O library

    RabbitBio/RabbitBAM-QC’s past year of commit activity
    C++ 0 0 0 0 Updated Aug 12, 2024
  • SWQC Public

    An Efficient Sequencing Data Quality Control Tool on Sunway Platform

    RabbitBio/SWQC’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Jul 3, 2024
  • RabbitKSSD Public

    RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures

    RabbitBio/RabbitKSSD’s past year of commit activity
    C++ 10 1 0 1 Updated Jun 5, 2024
  • RabbitSAlign Public Forked from yanlifeng/strobealign-fast

    GPU Acceleration of Short Read Alignment for Heterogeneous Multicore Platforms

    RabbitBio/RabbitSAlign’s past year of commit activity
    C++ 4 MIT 18 0 0 Updated Jun 3, 2024
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