LFMD

Low Frequency Mutation Detector

Install

wget https://github.com/RainyEricYe/LFMD.git

Rui Ye et al. LFMD: detecting low-frequency mutations in genome sequencing data without molecular tags. https://www.biorxiv.org/content/10.1101/617381v9

vi lfmd2.sh && ajust parameters and file paths
sh lfmd2.sh in.fq1 in.fq2 outprefix