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Added miRNA extension to spec
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srynobio authored Jul 15, 2019
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Expand Up @@ -710,13 +710,24 @@ chrX . CDS XXXX YYYY . + . Parent=tran01;Derives_from=gene04</pre>
<p>The regulatory element ("promoter" in this example) is part of the operon via the Parent tag. The four genes are part of the operon, and the resulting mRNA is multiply-parented by the four genes, as in the earlier example.</p>
<p>At the time of this writing, promoters and other cis-regulatory elements cannot be part_of an operon, but this restriction is being reconsidered.</p>
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<dt>miRNA extension</dt>
<dd>
<p>mirGFF3 format is adapted from the GFF3 definition to contain miRNA/isomiRs information from miRNA-seq data. The main difference is at the Attributes column, where these fields are mandatory: Variant, Cigar, Hits, Expression and Filter. To understand more about each one, please visit the main repository <li>https://github.com/miRTop/mirGFF3</li></p>
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</dd>
</dl>

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#### Change Log

<dl>
<dt>1.24 Mon 15 July 2019</dt>
<dd>
<ul>
<li>Added miRNA extension to the pathological cases.</li>
</ul>
</dd>
<dt>1.23 Fri 3 Oct 2016</dt>
<dd>
<ul>
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