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xiangzhu committed Jun 6, 2021
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137 changes: 65 additions & 72 deletions docs/function.html
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<title>Function Reference</title>

<script src="site_libs/header-attrs-2.8/header-attrs.js"></script>
<script src="site_libs/jquery-1.11.3/jquery.min.js"></script>
<meta name="viewport" content="width=device-width, initial-scale=1" />
<link href="site_libs/bootstrap-3.3.5/css/sandstone.min.css" rel="stylesheet" />
<script src="site_libs/bootstrap-3.3.5/js/bootstrap.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/html5shiv.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/respond.min.js"></script>
<style>h1 {font-size: 34px;}
h1.title {font-size: 38px;}
h2 {font-size: 30px;}
h3 {font-size: 24px;}
h4 {font-size: 18px;}
h5 {font-size: 16px;}
h6 {font-size: 12px;}
code {color: inherit; background-color: rgba(0, 0, 0, 0.04);}
pre:not([class]) { background-color: white }</style>
<script src="site_libs/navigation-1.1/tabsets.js"></script>
<script src="site_libs/accessible-code-block-0.0.1/empty-anchor.js"></script>
<link href="site_libs/font-awesome-5.1.0/css/all.css" rel="stylesheet" />
<link href="site_libs/font-awesome-5.1.0/css/v4-shims.css" rel="stylesheet" />

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}
</style>



<style type="text/css">
code{white-space: pre-wrap;}
span.smallcaps{font-variant: small-caps;}
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<style type="text/css">
h1 {
font-size: 34px;
}
h1.title {
font-size: 38px;
}
h2 {
font-size: 30px;
}
h3 {
font-size: 24px;
}
h4 {
font-size: 18px;
}
h5 {
font-size: 16px;
}
h6 {
font-size: 12px;
}
.table th:not([align]) {
text-align: left;
}
</style>




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margin-left: auto;
margin-right: auto;
}
code {
color: inherit;
background-color: rgba(0, 0, 0, 0.04);
}
img {
max-width:100%;
}
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summary {
display: list-item;
}
pre code {
padding: 0;
}
</style>


<style type="text/css">
/* padding for bootstrap navbar */
body {
padding-top: 51px;
padding-bottom: 40px;
}
/* offset scroll position for anchor links (for fixed navbar) */
.section h1 {
padding-top: 56px;
margin-top: -56px;
}
.section h2 {
padding-top: 56px;
margin-top: -56px;
}
.section h3 {
padding-top: 56px;
margin-top: -56px;
}
.section h4 {
padding-top: 56px;
margin-top: -56px;
}
.section h5 {
padding-top: 56px;
margin-top: -56px;
}
.section h6 {
padding-top: 56px;
margin-top: -56px;
}
.dropdown-submenu {
position: relative;
}
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margin-right: -10px;
}
.dropdown-submenu:hover>a:after {
border-left-color: #ffffff;
border-left-color: #adb5bd;
}
.dropdown-submenu.pull-left {
float: none;
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}
</style>

<script>
<script type="text/javascript">
// manage active state of menu based on current page
$(document).ready(function () {
// active menu anchor
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var menuAnchor = $('a[href="' + href + '"]');

// mark it active
menuAnchor.parent().addClass('active');
menuAnchor.tab('show');

// if it's got a parent navbar menu mark it active as well
menuAnchor.closest('li.dropdown').addClass('active');

// Navbar adjustments
var navHeight = $(".navbar").first().height() + 15;
var style = document.createElement('style');
var pt = "padding-top: " + navHeight + "px; ";
var mt = "margin-top: -" + navHeight + "px; ";
var css = "";
// offset scroll position for anchor links (for fixed navbar)
for (var i = 1; i <= 6; i++) {
css += ".section h" + i + "{ " + pt + mt + "}\n";
}
style.innerHTML = "body {" + pt + "padding-bottom: 40px; }\n" + css;
document.head.appendChild(style);
});
</script>

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max-height: 500px;
min-height: 44px;
overflow-y: auto;
background: white;
border: 1px solid #ddd;
border-radius: 4px;
}
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<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/SUwonglab/rss-net">
<span class="fa fa-github"></span>
<span class="fab fa-github"></span>

</a>
</li>
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</div><!--/.container -->
</div><!--/.navbar -->

<div class="fluid-row" id="header">
<div id="header">



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<div class="tab-content">
<div id="summary" class="tab-pane fade in active">
<p>
<strong>Last updated:</strong> 2020-12-02
<strong>Last updated:</strong> 2021-06-06
</p>
<p>
<strong>Checks:</strong> <span class="glyphicon glyphicon-ok text-success" aria-hidden="true"></span> 2 <span class="glyphicon glyphicon-exclamation-sign text-danger" aria-hidden="true"></span> 0
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<div class="panel panel-default">
<div class="panel-heading">
<p class="panel-title">
<a data-toggle="collapse" data-parent="#workflowr-checks" href="#strongRepositoryversionstrongahrefhttpsgithubcomSUwonglabrssnettreebc64ea5c98aac26a751235935d5bc9cae3a5df9atargetblankbc64ea5a"> <span class="glyphicon glyphicon-ok text-success" aria-hidden="true"></span> <strong>Repository version:</strong> <a href="https://github.com/SUwonglab/rss-net/tree/bc64ea5c98aac26a751235935d5bc9cae3a5df9a" target="_blank">bc64ea5</a> </a>
<a data-toggle="collapse" data-parent="#workflowr-checks" href="#strongRepositoryversionstrongahrefhttpsgithubcomSUwonglabrssnettreece99060fe8bed40f0032e808a6a6dcbcc61d004etargetblankce99060a"> <span class="glyphicon glyphicon-ok text-success" aria-hidden="true"></span> <strong>Repository version:</strong> <a href="https://github.com/SUwonglab/rss-net/tree/ce99060fe8bed40f0032e808a6a6dcbcc61d004e" target="_blank">ce99060</a> </a>
</p>
</div>
<div id="strongRepositoryversionstrongahrefhttpsgithubcomSUwonglabrssnettreebc64ea5c98aac26a751235935d5bc9cae3a5df9atargetblankbc64ea5a" class="panel-collapse collapse">
<div id="strongRepositoryversionstrongahrefhttpsgithubcomSUwonglabrssnettreece99060fe8bed40f0032e808a6a6dcbcc61d004etargetblankce99060a" class="panel-collapse collapse">
<div class="panel-body">
<p>
Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.
</p>
<p>
The results in this page were generated with repository version <a href="https://github.com/SUwonglab/rss-net/tree/bc64ea5c98aac26a751235935d5bc9cae3a5df9a" target="_blank">bc64ea5</a>. See the <em>Past versions</em> tab to see a history of the changes made to the R Markdown and HTML files.
The results in this page were generated with repository version <a href="https://github.com/SUwonglab/rss-net/tree/ce99060fe8bed40f0032e808a6a6dcbcc61d004e" target="_blank">ce99060</a>. See the <em>Past versions</em> tab to see a history of the changes made to the R Markdown and HTML files.
</p>
<p>
Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use <code>wflow_publish</code> or <code>wflow_git_commit</code>). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:
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Ignored: examples/ibd2015_nkcell/results/
Ignored: examples/wtccc_bcell/results/

Untracked files:
Untracked: README.html

Unstaged changes:
Modified: README.md
Modified: rmd/_site.yml

</code></pre>
<p>
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.
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html
</td>
<td>
<a href="https://rawcdn.githack.com/SUwonglab/rss-net/ce99060fe8bed40f0032e808a6a6dcbcc61d004e/docs/function.html" target="_blank">ce99060</a>
</td>
<td>
xiangzhu
</td>
<td>
2020-12-02
</td>
<td>
Build site.
</td>
</tr>
<tr>
<td>
html
</td>
<td>
<a href="https://rawcdn.githack.com/SUwonglab/rss-net/9ade0e61e361ca28b371c8107ea31c6a0ec8d070/docs/function.html" target="_blank">9ade0e6</a>
</td>
<td>
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</div>

<script>
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$(document).ready(function () {
$('.tabset-dropdown > .nav-tabs > li').click(function () {
$(this).parent().toggleClass('nav-tabs-open')
$(this).parent().toggleClass('nav-tabs-open');
});
});
</script>
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