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python module to plot beautiful and highly customizable genome browser tracks

Python 782 115 Updated Jul 10, 2024

A data framework for biology.

Python 132 13 Updated Dec 20, 2024
Python 13 4 Updated Aug 13, 2023

pseudobulking on an AnnData object

Python 28 1 Updated Jun 30, 2023

Models and datasets for perturbational single-cell omics

Jupyter Notebook 148 13 Updated Aug 19, 2022

A repo with random short code snippets

Jupyter Notebook 41 11 Updated May 27, 2019

This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster

HTML 165 89 Updated Mar 23, 2021