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Commits on Jun 28, 2019

• Merge branch 'master' of bitbucket.org:pmadhikar/celldiv

  pmadhikar

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• Merge branch 'master' of github.com:SoftSimu/CellSim3D

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Commits on May 17, 2019

• Create rc file to add the simulator and python modules environment

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Commits on Apr 14, 2019

• Update requirements.txt to avoid the bad jinja2 version

  pmadhikar

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Commits on Jan 19, 2019

• Tweak packing calculation

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Commits on Jan 4, 2019

• Update pyyaml version to one without a security vulnerability

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Commits on Jan 2, 2019

• Merge branch 'master' of bitbucket.org:pmadhikar/celldiv

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  3a86f9e

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• Better output file name

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• Merge branch 'master' of bitbucket.org:pmadhikar/celldiv

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• Correctly calculate centers of mass for an epithelial system

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• New analysis script that calculates the nearest neighbour values

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Commits on Mar 8, 2018

• Fix incorrect reading of cell stiffness

  pmadhikar

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Commits on Feb 12, 2018

• Add requirements.txt files for the python scripts.

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Commits on Jul 9, 2017

• Change scripts/xyzafy.py to allow outputting only one specified frame

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• Slight adjustments to get the plotting code working

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Commits on May 4, 2017

• Change the render script color values to RGB

  pmadhikar

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Commits on Mar 30, 2017

• I don't remember what this changes. Whatever...

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Commits on Mar 7, 2017

• Format compliance and some minor bug fixes

  pmadhikar

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  db1f8c9

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• Change to accommodate slightly condensed force csvs

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• Fix polygon filling in cs.py

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• Changes to cs.py: Add finer control to analysis

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• Add in the xyzafy script

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Commits on Feb 6, 2017

• Add bunch of code to debug integrator

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Commits on Nov 29, 2016

• Add script to plot kinetic energy

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• Update to render.py

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• Add Force coloring support to cs.py

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Commits on Oct 12, 2016

• Add option to blender render script for a white bg

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Commits on Oct 5, 2016

• new script to generate cross-sections

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• Fix incorrect help text

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Commits on Sep 8, 2016

• Make flags single -

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  d389c5b

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• Adjust some defaults for input params

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• Add support for distinguishing cell types

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Commits on Aug 19, 2016

• Fix error handling and correctly set limits

  pmadhikar

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  581f0d7

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• Fix newline

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  1914ec8

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• Specify python3

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