feat: added MAR20181-3 to represent transport functions of SLC25A19

SysBioChalmers · Apr 24, 2024 · 34f6271 · 34f6271
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diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml
@@ -304730,6 +304730,60 @@
       - subsystem:
           - "Exchange/demand reactions"
       - confidence_score: 0
+    - !!omap
+      - id: "MAR20181"
+      - name: "Antiport of thiamine-diphosphate and thiamine-phosphate"
+      - metabolites: !!omap
+          - MAM02983c: -1
+          - MAM02983m: 1
+          - MAM02984c: 1
+          - MAM02984m: -1
+      - lower_bound: -1000
+      - upper_bound: 1000
+      - gene_reaction_rule: "ENSG00000125454"
+      - rxnNotes: ""
+      - rxnFrom: ""
+      - eccodes: ""
+      - references: "PMID:17035501"
+      - subsystem:
+          - "Transport reactions"
+      - confidence_score: 0
+    - !!omap
+      - id: "MAR20182"
+      - name: "Antiport of thiamine-phosphate and dATP"
+      - metabolites: !!omap
+          - MAM01642c: -1
+          - MAM01642m: 1
+          - MAM02983c: 1
+          - MAM02983m: -1
+      - lower_bound: -1000
+      - upper_bound: 1000
+      - gene_reaction_rule: "ENSG00000125454"
+      - rxnNotes: ""
+      - rxnFrom: ""
+      - eccodes: ""
+      - references: "PMID:17035501"
+      - subsystem:
+          - "Transport reactions"
+      - confidence_score: 0
+    - !!omap
+      - id: "MAR20183"
+      - name: "Antiport of thiamine-diphosphate and dATP"
+      - metabolites: !!omap
+          - MAM01642c: -1
+          - MAM01642m: 1
+          - MAM02984c: 1
+          - MAM02984m: -1
+      - lower_bound: -1000
+      - upper_bound: 1000
+      - gene_reaction_rule: "ENSG00000125454"
+      - rxnNotes: ""
+      - rxnFrom: ""
+      - eccodes: ""
+      - references: "PMID:17035501"
+      - subsystem:
+          - "Transport reactions"
+      - confidence_score: 0
 - genes:
     - !!omap
       - id: "ENSG00000000419"

diff --git a/model/reactions.tsv b/model/reactions.tsv
@@ -12972,3 +12972,6 @@ rxns	rxnKEGGID	rxnBiGGID	rxnEHMNID	rxnHepatoNET1ID	rxnREACTOMEID	rxnRecon3DID	rx
 "MAR20178"	"R10998"	""	""	""	""	""	"MNXR114302"	""	""	""	0	""	""	""
 "MAR20179"	""	""	""	""	""	""	""	""	""	""	0	""	""	""
 "MAR20180"	""	""	""	""	""	""	""	""	""	""	0	""	""	""
+"MAR20181"	""	""	""	""	""	""	""	""	""	"2.A.29.16.1"	0	"RHEA:73386"	"RHEA:73383"	""
+"MAR20182"	""	""	""	""	""	""	""	""	""	"2.A.29.16.1"	0	""	""	""
+"MAR20183"	""	""	""	""	""	""	""	""	""	"2.A.29.16.1"	0	""	""	""