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Learning meaningful representations of genes
CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration
R package implementation of Milo for testing for differential abundance in KNN graphs
An implementation of the Grammar of Graphics in R
Spatial Transcriptomics Capture Location Deconvolution
R package to install, manage and run Pandoc (https://pandoc.org/)
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
Scripts to document how to get the tonsil atlas dataset ready to upload to the cell annotation platform (CAP)
Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)
Color palette package in R inspired by works at the Metropolitan Museum of Art in New York
Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow
High dimensional weighted gene co-expression network analysis
📊 A universal enrichment tool for interpreting omics data
🎨 ML Visuals contains figures and templates which you can reuse and customize to improve your scientific writing.
提取微信聊天记录，将其导出成HTML、Word、Excel文档永久保存，对聊天记录进行分析生成年度聊天报告，用聊天数据训练专属于个人的AI聊天助手
PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
Solutions to all questions of the book Introduction to the Theory of Computation, 3rd edition by Michael Sipser
🍺 The missing package manager for macOS (or Linux)
List of useful Quick Look plugins for developers
Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the response of CD4+ T cells to cytokines"