TarkhovAndrei
Follow
Stars
Lo-Hi Splitter for Modern Splits of Molecular Datasets
NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Semi-supervised adversarial neural networks for classification of single cell transcriptomics data
Profiling epigenetic age in single cells
Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=annotatr.
Code for the calculation and implementation of the PC Based epigenetic clocks
Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.
DNA methylation studies of mammalian species
An interactive explorer for single-cell transcriptomics data
Multi-instance ML for ligand bioactivity prediction
Supervised Classification of bird species 🐦 in high resolution images, especially for, Himalayan birds, having diverse species with fairly low amount of labelled data [ICVGIPW'18]
Explores jigsaw puzzles solvinig as pre-text task for fine grained classification for bird species identification (Implemented with pyTorch)
Code used for my final project in Computer Vision at Texas State University, Spring 2019
Fine-grained species classification
Bird Classifier developped in tensorflow using pre-trained model from Tensorflow Hub and running on Google Colab
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
Junction Tree Variational AutoEncoder Implementation Attempt
⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
A python module for generating interactive views of chemical spaces.
User interface to perform quantum transport calculations with non equilibrium Green's functions
DMRGPy is a Python library to compute quasi-one-dimensional spin chains and fermionic systems using matrix product states with DMRG as implemented in ITensor. Most of the computations can be perfor…
Ipython notebooks for our QM class based on Mark Beck's book "Quantum Mechanics: Theory and Experiment"