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git-svn-id: https://r-oce.googlecode.com/svn/trunk@122 3dc979fe-ab3f-0410-b117-8d365baceae5
TheEarnest · Dec 15, 2007 · f6cf20a · f6cf20a
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diff --git a/man/a03.Rd b/man/a03.Rd
@@ -23,5 +23,5 @@ plot(a03g,station.indices=seq(124,102),coastline=coastline.world,map.xlim=c(-80,
 \source{\url{http://cchdo.ucsd.edu/data_access?ExpoCode=90CT40_1} (use the \emph{BOT} link in the \emph{Exchange} section of this page.)}
 \references{\url{http://cchdo.ucsd.edu}}
 \seealso{This was read with \code{\link{read.section}(a03_hy1.csv)}, working a data file downloaded from the CCHDO site mentioned above.}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/as.coastline.Rd b/man/as.coastline.Rd
@@ -37,5 +37,5 @@ coastline.halifax<-as.coastline(latitude[c(HH,GI)],longitude[c(HH,GI)]-360)
 The NOAA site \url{http://www.ngdc.noaa.gov/mgg/shorelines/shorelines.html}
 is a good source for coastline data files.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/as.ctd.Rd b/man/as.ctd.Rd
@@ -51,7 +51,5 @@ S <- 35 - p / 100
 ctd <- as.ctd(S, T, p)
 summary(ctd)
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/as.sealevel.Rd b/man/as.sealevel.Rd
@@ -64,5 +64,5 @@ summary(sl)
 \references{
   \url{ftp://ilikai.soest.hawaii.edu/rqds/hourly.fmt}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/coastline.halifax.Rd b/man/coastline.halifax.Rd
@@ -12,5 +12,5 @@ The little island at about 44.64N is visible outside the author's window.}
 \code{\link{as.coastline}}.  Another
 sample coastline file is \code{\link{coastline.maritimes}}; see these for details of the data format.   Other coastline datasets provided with
 oce are \code{\link{coastline.maritimes}} and \code{\link{coastline.world}}.}
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/coastline.maritimes.Rd b/man/coastline.maritimes.Rd
@@ -14,5 +14,5 @@ dataset at the NOAA site.}
 \code{\link{read.coastline}}, or created with
 \code{\link{as.coastline}}; see these for details of the data format.  Other coastline datasets provided with
 oce are \code{\link{coastline.halifax}} and \code{\link{coastline.world}}.}
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/coastline.world.Rd b/man/coastline.world.Rd
@@ -12,5 +12,5 @@ western longitudes have negative values.}
 \code{\link{read.coastline}}, or created with
 \code{\link{as.coastline}}; see these for details of the data format.  Other coastline datasets provided with
 oce are \code{\link{coastline.halifax}} and \code{\link{coastline.maritimes}}.}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/coriolis.Rd b/man/coriolis.Rd
@@ -29,5 +29,5 @@ Compute \eqn{f}{f}, the Coriolis parameter as a function of latitude.
  Gill, A.E., 1982. \emph{Atmosphere-ocean Dynamics}, 
  Academic Press, New York, 662 pp.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.Rd b/man/ctd.Rd
@@ -18,5 +18,5 @@ column.}
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.  
   See link{read.ctd} for the data format.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.add.column.Rd b/man/ctd.add.column.Rd
@@ -45,5 +45,5 @@ ctd.new <- ctd.add.column(ctd,
   The Seabird CTD instrument is described at
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.decimate.Rd b/man/ctd.decimate.Rd
@@ -59,7 +59,5 @@ data(ctd.raw)
 ctd.clean <- ctd.decimate(ctd.trim(ctd.raw))
 summary(ctd.clean)
 }
-%\references{
-%}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.raw.Rd b/man/ctd.raw.Rd
@@ -14,5 +14,5 @@ data that need trimming with \code{\link{ctd.trim}}.}
 the Bedford Basin of the Halifax Harbour, during an 
 October 2003 field trip of Dalhousie University's 
 Oceanography 4120/5120 class.}
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.trim.Rd b/man/ctd.trim.Rd
@@ -93,5 +93,5 @@ plot(ctd.decimate(ctd.trim(ctd.raw),method="boxcar")) # ... smoothed
   The Seabird CTD instrument is described at
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.update.header.Rd b/man/ctd.update.header.Rd
@@ -32,5 +32,5 @@ ctd.new <- ctd.update.header(ctd)
   The Seabird CTD instrument is described at
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/ctd.write.Rd b/man/ctd.write.Rd
@@ -29,5 +29,5 @@ ctd.write(ctd, "ctd.cnv")
   The Seabird CTD instrument is described at
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/geod.dist.Rd b/man/geod.dist.Rd
@@ -44,5 +44,5 @@ along the track starting from zero.
  km <- geod.dist(45, 100, 46, 100)/1000 
 }
 \references{}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca} packaged this, based on R code sent to him by Darren Gillis, who in 2003 had modified Fortran code written in 1974 by (according to comment cards in the source) L. Pfeifer and J. G. Gergen.}
+\author{Dan Kelley packaged this, based on R code sent to him by Darren Gillis, who in 2003 had modified Fortran code written in 1974 by (according to comment cards in the source) L. Pfeifer and J. G. Gergen.}
 \keyword{misc}
diff --git a/man/gravity.Rd b/man/gravity.Rd
@@ -32,5 +32,5 @@ Compute \eqn{g}{g}, the acceleration due to gravity, as a function of latitude.
  \strong{Caution:} Fofonoff and Millard (1983 UNESCO) use a different
 formula.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/lat.format.Rd b/man/lat.format.Rd
@@ -21,7 +21,5 @@ Format a latitude, using "S" for negative latitude.
 }
 \examples{
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/latlon.format.Rd b/man/latlon.format.Rd
@@ -22,7 +22,5 @@ Format a latitude-longitude pair, using "S" for negative latitudes, etc.
 }
 \examples{
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/lobo.Rd b/man/lobo.Rd
@@ -12,5 +12,5 @@ of Halifax by Satlantic.}
   \url{http://www.satlantic.com/default.asp?mn=1.15.27.139}.
   \url{http://www.mbari.org/lobo/}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/lon.format.Rd b/man/lon.format.Rd
@@ -21,7 +21,5 @@ Format a longitude, using "W" for west longitude.
 }
 \examples{
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/magic.Rd b/man/magic.Rd
@@ -22,5 +22,5 @@ magic(file)
 \seealso{
 This is used mainly by \code{\link{read.oce}}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/make.section.Rd b/man/make.section.Rd
@@ -29,7 +29,5 @@ section <- make.section(ctd, ctd.warmed)
 summary(section)
 plot(section, at=c(1,2), labels=c("Original","Warmed"))
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/oce.as.POSIXlt.Rd b/man/oce.as.POSIXlt.Rd
@@ -28,7 +28,5 @@ A POSIXlt object.
 }
 \examples{
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.TS.Rd b/man/plot.TS.Rd
@@ -63,6 +63,5 @@ TT <- Trange[1] + (Trange[2] - Trange[1]) *(1:N)/(N-1) + 0.01*rnorm(N)
 plot.TS(as.ctd(S=SS, T=TT, p=0))
 }
 }
-\references{}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.coastline.Rd b/man/plot.coastline.Rd
@@ -27,7 +27,5 @@ library(oce)
 data(coastline.world)
 plot(coastline.world)
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.ctd.Rd b/man/plot.ctd.Rd
@@ -34,7 +34,5 @@ library(oce)
 data(ctd) 
 plot(ctd)
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.ctd.scan.Rd b/man/plot.ctd.scan.Rd
@@ -33,7 +33,5 @@ library(oce)
 data(ctd) 
 plot.ctd.scan(ctd)
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.lobo.Rd b/man/plot.lobo.Rd
@@ -36,5 +36,5 @@ plot(d)
 \url{http://www.satlantic.com/default.asp?mn=1.15.27.139}
 \url{http://www.mbari.org/lobo/}
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.profile.Rd b/man/plot.profile.Rd
@@ -61,7 +61,5 @@ plot(ctd)
 plot.profile(ctd, type="T")
 }
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.sealevel.Rd b/man/plot.sealevel.Rd
@@ -65,5 +65,5 @@ to the topic, with the Canadian Hurricane Centre's
 \url{http://www.atl.ec.gc.ca/weather/hurricane/juan/summary_e.html}
 filling in some more technical details.
 }
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/plot.section.Rd b/man/plot.section.Rd
@@ -68,5 +68,5 @@ data(coastline.world)
 # Select the Gulf Stream region
 plot(a03g,station.indices=seq(124,102),coastline=coastline.world,map.xlim=c(-80,-60))
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/processing.log.append.Rd b/man/processing.log.append.Rd
@@ -25,7 +25,5 @@ stn15$latitude <- stn15$latitude + 1
 stn15 <- processing.log.append(stn15, "DEK: add 1 to latitude, correcting a typo")
 }
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/processing.log.summary.Rd b/man/processing.log.summary.Rd
@@ -25,5 +25,5 @@ processing.log.summary(ctd)
 }
 \references{
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/read.coastline.Rd b/man/read.coastline.Rd
@@ -55,5 +55,5 @@ lines(cl$data$longitude-360, cl$data$latitude)
 The NOAA site \url{http://www.ngdc.noaa.gov/mgg/shorelines/shorelines.html}
 is a good source for coastline data files.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/read.ctd.Rd b/man/read.ctd.Rd
@@ -111,5 +111,5 @@ it does a reasonable job in many instances.
 The WOCE-exchange format is described at
 \url{http://www.nodc.noaa.gov/woce_V2/disk02/exchange/exchange_format_desc.htm}
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/read.lobo.Rd b/man/read.lobo.Rd
@@ -69,5 +69,5 @@ summary(lobo)
 \url{http://www.satlantic.com/default.asp?mn=1.15.27.139}
 \url{http://www.mbari.org/lobo/}
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/read.oce.Rd b/man/read.oce.Rd
@@ -43,5 +43,5 @@ plot(x) # summary with TS and profiles
 plot.TS(x) # just the TS
 }
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/read.sealevel.Rd b/man/read.sealevel.Rd
@@ -61,6 +61,6 @@ provides a graphical interface for downloading sealevel data; the format is desc
 \url{ftp://ilikai.soest.hawaii.edu/rqds/hourly.fmt}. The MEDS data are at
 \url{http://www.meds-sdmm.dfo-mpo.gc.ca/meds/Databases/TWL/TWL_inventory_e.htm}.}
 
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 
 \keyword{misc}
diff --git a/man/read.section.Rd b/man/read.section.Rd
@@ -51,5 +51,5 @@ bottle data"} should turn up other sites, if this one ceases to exist. Only the
 so-called \emph{exchange BOT} data format can be processed by read.section() at
 this time.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sealevel.Rd b/man/sealevel.Rd
@@ -9,5 +9,5 @@ Note that Hurricane Juan hit Halifax on September 28th of 2003, causing a strong
 \references{The MEDS archive is at \url{http://www.meds-sdmm.dfo-mpo.gc.ca/meds/Databases/TWL/TWL_inventory_e.htm}.
 An entry to the literature about Hurricane Juan is at
 \url{http://www.atl.ec.gc.ca/weather/hurricane/juan/}.}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/section.Rd b/man/section.Rd
@@ -42,5 +42,5 @@ the lovely Point Pleasant Park.
 A summary of the stations can be obtained from \code{\link{summary.section}},
 and a plot can be created with \code{\link{plot.section}}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/section.grid.Rd b/man/section.grid.Rd
@@ -29,7 +29,5 @@ data(coastline.world)
 # Select the Gulf Stream region
 plot(a03g,station.indices=seq(124,102),coastline=coastline.world,map.xlim=c(-80,-60))
 }
-\references{
-}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/section.subset.R → man/section.subset.Rd b/man/section.subset.R → man/section.subset.Rd
diff --git a/man/summary.coastline.Rd b/man/summary.coastline.Rd
@@ -30,5 +30,5 @@ plot(cl)
 \references{
 http://www.ngdc.noaa.gov/mgg/shorelines/shorelines.html
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/summary.ctd.Rd b/man/summary.ctd.Rd
@@ -35,5 +35,5 @@ summary(profile)
   The Seabird CTD instrument is described at
   \url{http://www.seabird.com/products/spec_sheets/19plusdata.htm}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/summary.lobo.Rd b/man/summary.lobo.Rd
@@ -37,5 +37,5 @@ summary(l)
 \url{http://www.satlantic.com/default.asp?mn=1.15.27.139}
 \url{http://www.mbari.org/lobo/}
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/summary.sealevel.Rd b/man/summary.sealevel.Rd
@@ -27,5 +27,5 @@ summary(sealevel)
 \references{
 \url{ftp://ilikai.soest.hawaii.edu/rqds/hourly.fmt}.
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/summary.section.Rd b/man/summary.section.Rd
@@ -33,5 +33,5 @@ library(oce)
 data(section)
 summary(section)
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sw.N2.Rd b/man/sw.N2.Rd
@@ -52,6 +52,5 @@ abline(v=0)
 lines(sw.N2(p,sigthe,df=length(p)/4), -p)
 abline(v=0)
 }
-\references{}
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sw.S.C.T.p.Rd b/man/sw.S.C.T.p.Rd
@@ -37,5 +37,5 @@ print(sw.S.C.T.p(0.65,5,1500)) # 27.99535
  fundamental properties of seawater. \emph{Unesco Technical Papers in Marine
  Science}, \bold{44}, 53 pp
 }
-\author{Dan Kelley \email{Dan.Kelley@Dal.Ca}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sw.S.T.rho.Rd b/man/sw.S.T.rho.Rd
@@ -37,5 +37,5 @@ with this function.
  Gill, A.E., 1982. \emph{Atmosphere-ocean Dynamics}, 
  Academic Press, New York, 662 pp.
 }
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sw.T.S.rho.Rd b/man/sw.T.S.rho.Rd
@@ -34,5 +34,5 @@ temperature <- sw.T.S.rho(S, sig, p)
  Gill, A.E., 1982. \emph{Atmosphere-ocean Dynamics}, 
  Academic Press, New York, 662 pp.
 }
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}
diff --git a/man/sw.T.freeze.Rd b/man/sw.T.freeze.Rd
@@ -32,5 +32,5 @@ UNESCO tech. papers in the marine science no. 28. 1978
 eighth report JPOTS
 Annex 6 freezing point of seawater F.J. Millero pp.29-35.
 }
-\author{Dan Kelley \email{[email protected]}}
+\author{Dan Kelley}
 \keyword{misc}