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Haplotype-resolved hybrid pepper genome with trio binning

Welcome to the Pepper Triobinning Genome Assembly github for our Capsicum annuum 2023 study Germplasm lines are HDA149 and HDA330. Their F1 offspring is called 'F1 (HDA149xHDA330)' or simply the F1

The HDA149 v1.0 and HDA330v1.0 genome assemblies and the raw data used to generate them can be found at:

  1. Capsicum_annuum_HDA149v1.0
  2. Capsicum_annuum_HDA149v1.0

Look in the wiki to find step-by-step instructions to recreate the assemblies and analyze them.

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