Collection of scripts, pipelines and files used to create a new dataset of scRNA-Seq data for my project:
The project is focused on the creation of a new collection of scRNA-Seq studies of Bone marrow samples from Multiple myeloma patients.
To made the studies comparable I decided to pre-process all the files from raw files (fastq/bam/sra), from the alignment to the batch-correction and cell type identification.
The repo is organised in: