R script for multiple BAM alignments viewing using Gviz (bioconductor package)

Enhancing {ggplot2} plots with statistical analysis 📊📣

A visit-based contact tracing application built to consume healthcare encounter data.

STAR based ENCODE Long RNA-Seq processing pipeline

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

Personal notes about work- and coding-related topics

A short tutorial on how to use RSEM

Training requirements for joining projects

Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods

Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools

RNAseq analysis notes from Ming Tang

This is a list of projects which have curated tasks specifically for new contributors. These issues are a great way to get started with a project, or to help share the load of working on open sourc…