WSSU-Nanopore-Workshop-Fall2023

Jupyter notebook files for bioinformatics portion of Space Microbiology Nanopore Workshop at Winston-Salem State University in Fall of 2023

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
.ipynb_checkpoints		.ipynb_checkpoints
bracken_results		bracken_results
.DS_Store		.DS_Store
.gitignore		.gitignore
Analysis of Bracken data in R with phyloseq.ipynb		Analysis of Bracken data in R with phyloseq.ipynb
Filtering and assigning taxonomy to reads using Epi2me.ipynb		Filtering and assigning taxonomy to reads using Epi2me.ipynb
Intro to jupyter notebooks and bash.ipynb		Intro to jupyter notebooks and bash.ipynb
LICENSE		LICENSE
Organizing and visualizing Nanopore data.ipynb		Organizing and visualizing Nanopore data.ipynb
Passing data to phyloseq.ipynb		Passing data to phyloseq.ipynb
README.md		README.md
Welcome Page.ipynb		Welcome Page.ipynb
Zymo_16S_table.biom		Zymo_16S_table.biom
jess16s.tar.gz		jess16s.tar.gz
zymo_standard_bacteriaonly.csv		zymo_standard_bacteriaonly.csv

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