Code enhancements

- Made all the secondary tables AJAX
- Implemented column showing/hiding

search/models.py

@@ -312,6 +312,18 @@ class Meta:
         managed = False
         db_table = 'vw_DrugTargets'
 
+class vwDiseases(models.Model):
+    hgnc_id = models.TextField(db_column='HGNC_ID', primary_key=True)
+    gene_symbol = models.TextField(db_column='gene_symbol')
+    disease_name = models.TextField(db_column='condition')
+    concept_id = models.TextField(db_column='concept_id')
+    disease_id = models.TextField(db_column='disease_id')
+    source = models.TextField(db_column='Source')
+
+    class Meta:
+        managed = False
+        db_table = 'vw_Diseases'
+
 class vwGeneInfo(models.Model):
     gene_symbol = models.TextField(db_column='gene_symbol')
     approved_name = models.TextField(db_column='approved_name')

search/urls.py

@@ -1,8 +1,9 @@
 from django.urls import path
-
+from django.conf.urls import url
 from . import views
 
 app_name='search'
 urlpatterns = [
     path('', views.index, name='index'),
+    url(r'^ajax/gene_details/$', views.gene_details, name='gene_details')
 ]

search/views.py

@@ -2,8 +2,9 @@
 from django.urls import reverse
 from django.views import generic
 from django.http import HttpResponse
+from django.http import JsonResponse
 
-from search.models import vwGeneInfo, vwDrugTargets, vwProteinInteractions
+from search.models import vwGeneInfo, vwDrugTargets, vwDiseases, vwProteinInteractions
 
 def index(request):
     # print("genelist:", genelist)
@@ -12,7 +13,7 @@ def index(request):
 
     genelist = []
     if search_terms != None:
-        gene_symbols = search_terms.split('\r\n')
+        gene_symbols = search_terms.upper().split('\r\n')
         for gene_symbol in gene_symbols:
             match = vwGeneInfo.objects.filter(gene_symbol = gene_symbol)
             if len(match) == 1:
@@ -23,18 +24,30 @@ def index(request):
 
     return render(request, 'search/index.html', context)
 
+def gene_details(request):
+    symbol = request.GET.get('gene_symbol')
+    data = {
+        'drug_targets': list(vwDrugTargets.objects.filter(gene_symbol = symbol).values()),
+        'diseases': list(vwDiseases.objects.filter(gene_symbol = symbol).values()),
+        'protein_interactions': list(vwProteinInteractions.objects.filter(geneSymbol1 = symbol).values())
+    }
+
+    return JsonResponse(data)
+
 
 class SearchResult:
 
     hgnc_id = None
     gene_symbol = None
     gene_info = None
     drug_targets = None
+    diseases = None
     protein_interactions = None
 
     def __init__(self, gene_info_record):
         self.hgnc_id = gene_info_record.hgnc_id
         self.gene_symbol = gene_info_record.gene_symbol
         self.gene_info = gene_info_record
-        self.drug_targets = vwDrugTargets.objects.filter(gene_symbol = self.gene_symbol)
-        self.protein_interactions = vwProteinInteractions.objects.filter(geneSymbol1 = self.gene_symbol)
+        # self.drug_targets = vwDrugTargets.objects.filter(gene_symbol = self.gene_symbol)
+        # self.diseases = vwDiseases.objects.filter(gene_symbol = self.gene_symbol)
+        # self.protein_interactions = vwProteinInteractions.objects.filter(geneSymbol1 = self.gene_symbol)