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  • Dana Farber Cancer Institute, Harvard School of Public Health
  • Boston

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Dimensionality reduction and batch integration methods for single cell data

R 16 2 Updated Feb 9, 2023

D3 JavaScript Network Graphs from R

R 654 266 Updated Feb 20, 2023

Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing

Jupyter Notebook 32 17 Updated Sep 22, 2017

Spatial factor analysis: a tool for decomposing species density into a small number of latent maps

C++ 14 5 Updated Jun 12, 2019

Google Cloud Platform BigTable back end for MultiAssayExperiment (experimental)

R 2 Updated Jan 29, 2017

Did you ever wish you could make scatter plots with cat shaped points? Now you can!

R 245 40 Updated Mar 18, 2018
HTML 1 Updated Aug 9, 2016

scratch repository for creating and sharing

R 1 2 Updated Aug 3, 2016

Three.js widgets for R and shiny

JavaScript 304 59 Updated Aug 19, 2022
Shell 3 Updated Nov 28, 2015

Basic R package for working with the NCI Cloud Pilots

R 10 11 Updated Jan 18, 2017

Repository for the NCI Cloud Pilot Workshop on May 24-25, 2016

Python 2 3 Updated Jun 2, 2016

A catalogue of docker images for NGS data analysis tools

8 4 Updated Jul 9, 2019

A framework for analysing public domain cancer cell line data and integrating it with proprietary compound screening data

HTML 4 3 Updated Jan 22, 2016

R package(s) demonstrating management of multiassay data on a set of samples

R 1 Updated Mar 31, 2015

IQSS Data Science Services workshop materials

HTML 78 183 Updated Mar 1, 2019

An interactive tool for the unsupervised clustering of cells from single cell RNA-Seq experiments.

R 8 Updated Jan 26, 2016

Turn your R code into a web API.

R 1,410 261 Updated Jan 31, 2025

Bayesian Consensus Clustering, packaged up from code by Eric F. Lock

R 19 5 Updated Jun 15, 2023

Modeling and correcting fragment sequence bias for RNA-seq

R 24 6 Updated Jun 4, 2024

Using R and Bioconductor packages for the analysis and comprehension of proteomics data.

TeX 90 35 Updated May 12, 2023

custom wrappers of frequently used R code

R 7 8 Updated Jul 22, 2024

R Client for Seven Bridges Genomics API (v1)

R 7 1 Updated Mar 4, 2021

go directly to https://github.com/ttriche/biocMultiQc2015/blob/master/vignettes/multiAssay.Rmd

2 Updated Jul 23, 2015

Color Chart in R

R 10 1 Updated Feb 8, 2015
JavaScript 96 892 Updated Jan 16, 2017

Coruses in R

1 Updated May 21, 2012

meta-analysis of gene expression and survival data

R 3 Updated May 31, 2011