Highlights
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adaptyvbio-egfr Public
Sequences from Adaptyv Bio’s EGFR Protein Design Competition
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single-cell-pseudotime Public
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
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awesome-self-driving-labs Public
Forked from AccelerationConsortium/awesome-self-driving-labsA curated list of self-driving laboratories that combine hardware automation and artificial intelligence to accelerate scientific discovery.
Creative Commons Zero v1.0 Universal UpdatedDec 6, 2024 -
boltz Public
Forked from jwohlwend/boltzOfficial repository for the Boltz-1 biomolecular interaction model
Python MIT License UpdatedNov 25, 2024 -
Awesome-Biomolecule-Language-Cross-Modeling Public
Forked from QizhiPei/Awesome-Biomolecule-Language-Cross-ModelingAwesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"
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competition_metrics Public
Forked from adaptyvbio/competition_metricsMetrics for our protein design competitions.
Python Apache License 2.0 UpdatedNov 3, 2024 -
BindCraft Public
Forked from martinpacesa/BindCraftUser friendly and accurate binder design pipeline
Jupyter Notebook MIT License UpdatedOct 31, 2024 -
Scientific-LLM-Survey Public
Forked from HICAI-ZJU/Scientific-LLM-SurveyScientific Large Language Models: A Survey on Biological & Chemical Domains
UpdatedOct 30, 2024 -
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ai-commentary-authors Public
"A renewed call for open artificial intelligence in biomedicine" author ordering
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papers_for_protein_design_using_DL Public
Forked from Peldom/papers_for_protein_design_using_DLList of papers about Proteins Design using Deep Learning
GNU General Public License v3.0 UpdatedJul 26, 2024 -
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folding_tools Public
Forked from biolists/folding_toolsA collection of *fold* tools
MIT License UpdatedJul 5, 2024 -
spras Public
Forked from Reed-CompBio/sprasSignaling Pathway Reconstruction Analysis Streamliner (SPRAS)
Python MIT License UpdatedJul 2, 2024 -
scikit-learn Public
Forked from scikit-learn/scikit-learnscikit-learn: machine learning in Python
Python Other UpdatedJun 1, 2024 -
Machine-learning-for-proteins Public
Forked from yangkky/Machine-learning-for-proteinsListing of papers about machine learning for proteins.
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rosetta Public
Forked from RosettaCommons/rosettaThe Rosetta Bio-macromolecule modeling package.
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esm Public
Forked from facebookresearch/esmEvolutionary Scale Modeling (esm): Pretrained language models for proteins
Python MIT License UpdatedFeb 7, 2024 -
proteomics-tutorial Public
Forked from jessegmeyerlab/proteomics-tutorial -
snakemake-demos Public
Forked from dpmerrell/snakemake-demosExample Snakefiles for various use cases
Python UpdatedJul 20, 2023 -
dmol-book Public
Forked from whitead/dmol-bookDeep learning for molecules and materials book
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sanbomics Public
Forked from mousepixels/sanbomicsbioinformatics plotting and tools
Python MIT License UpdatedApr 7, 2023 -
try-manubot Public
Forked from manubot/try-manubotA repository to practice contributing to a Manubot manuscript
HTML Other UpdatedFeb 25, 2023 -
covid19-review Public
Forked from greenelab/covid19-reviewA collaborative review of the emerging literature on diagnostics and treatments related to COVID-19
HTML Other UpdatedJan 16, 2023 -
manubot Public
Forked from manubot/manubotThe manuscript bot for automated scholarly publishing (Python package)
Python Other UpdatedOct 7, 2022 -
htcondor Public
Forked from Snakemake-Profiles/htcondorSnakemake profile for HTCondor
Python MIT License UpdatedAug 12, 2022 -
chtc-website-source Public
Forked from CHTC/chtc-website-sourceSource markdown and contents of the CHTC website
HTML UpdatedJun 8, 2022 -
my-manuscript Public
Test manuscript from https://github.com/manubot/rootstock