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@aifimmunology

Allen Institute for Immunology

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  1. PALMO PALMO Public

    Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset

    R 17 4

  2. MOCHA MOCHA Public template

    R package for single-cell Open Chromatin Identification & Downstream Analysis

    R 2

  3. TargetLink TargetLink Public

    Forked from adsilb/TargetLink

    Database of genes, drug targets, protein interactions, and other relationships

    Python 2

  4. Aging_Tcell_TEA-seq Aging_Tcell_TEA-seq Public

    Tri-modal single cell profiling reveals a novel pediatric CD8aa T cell subset and broad age-related molecular reprogramming across the T cell compartment.

    Jupyter Notebook 2 1

  5. aifi-healthy-pbmc-reference aifi-healthy-pbmc-reference Public

    Jupyter Notebook 2 1

  6. ArchR ArchR Public

    Forked from GreenleafLab/ArchR

    ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

    R 1 1

Repositories

Showing 10 of 40 repositories
  • aifimmunology/aifi-healthy-pbmc-reference’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated Dec 18, 2024
  • ArchR Public Forked from GreenleafLab/ArchR

    ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

    aifimmunology/ArchR’s past year of commit activity
    R 1 MIT 142 0 1 Updated Dec 10, 2024
  • SPARROW Public Forked from peiyaozhao617/SPARROW
    aifimmunology/SPARROW’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Dec 3, 2024
  • batchreporter Public
    aifimmunology/batchreporter’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 15, 2024
  • H5weaver Public

    R functions for reading, rearranging, and writing HDF5 files with 10x-compatible structure

    aifimmunology/H5weaver’s past year of commit activity
    R 0 0 2 0 Updated Nov 13, 2024
  • MOCHA Public template

    R package for single-cell Open Chromatin Identification & Downstream Analysis

    aifimmunology/MOCHA’s past year of commit activity
    R 2 GPL-3.0 0 13 4 Updated Nov 13, 2024
  • cell-hashing-pipeline Public

    Processing of scRNA-seq cell hashing data

    aifimmunology/cell-hashing-pipeline’s past year of commit activity
    R 0 0 0 0 Updated Oct 29, 2024
  • ALTRA-manuscript Public

    repository for codes to generate figures for ALTRA manuscript

    aifimmunology/ALTRA-manuscript’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Oct 29, 2024
  • IHA-Figure Public
    aifimmunology/IHA-Figure’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 24, 2024
  • CryoSCAPE Public
    aifimmunology/CryoSCAPE’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 5, 2024

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